RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 I3L2K1 104 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 CCSO14618 274 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
USP39-205ENST00000442708 SNCAP37840 140 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 EEF1AKMT3Q96AZ1 226 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 MISP3Q96FF7 219 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 OR10C1Q96KK4 312 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 RANGRFQ9HD47 186 aaPredicted RBP12.3□□□□□ -0.44
USP39-205ENST00000442708 ENY2Q9NPA8 101 aa12.3□□□□□ -0.44
USP39-205ENST00000442708 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
USP39-205ENST00000442708 IGHV3-48P01763 117 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 C12orf45Q8N5I9 185 aaPredicted RBP12.29□□□□□ -0.44
USP39-205ENST00000442708 UXS1Q8NBZ7 420 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 OR1L6Q8NGR2 347 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 VN1R17PQ8TDU5 208 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 DTD1Q8TEA8 209 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 CXorf58Q96LI9 332 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 MAGT1Q9H0U3 335 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
USP39-205ENST00000442708 THYN1Q9P016 225 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 MEGF8Q7Z7M0 2845 aa12.29□□□□□ -0.44
USP39-205ENST00000442708 TRBV7-1A0A0A6YYK4 115 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 CYB5BO43169 146 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 MT-CO2P00403 227 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 IFNA21P01568 189 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 KLF5Q13887 457 aaPredicted RBP12.28□□□□□ -0.44
USP39-205ENST00000442708 MLANAQ16655 118 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 ZC4H2Q9NQZ6 224 aa12.28□□□□□ -0.44
USP39-205ENST00000442708 FAM90A26D6RGX4 464 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 CLEC3BP05452 202 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 IAPPP10997 89 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 ARL3P36405 182 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 HTR2BP41595 481 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 IAH1Q2TAA2 248 aaPredicted RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 SAMD5Q5TGI4 173 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 ZBTB8BQ8NAP8 495 aaPredicted RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 PINX1Q96BK5 328 aaKnown RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 RCC1LQ96I51 464 aaKnown RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 FNDC4Q9H6D8 234 aaPredicted RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 C21orf62Q9NYP8 219 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 MRPL36Q9P0J6 103 aaKnown RBP12.27□□□□□ -0.45
USP39-205ENST00000442708 CACFD1Q9UGQ2 172 aa12.27□□□□□ -0.45
USP39-205ENST00000442708 OVOL1O14753 267 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 OR2C1O95371 312 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 PTTG1O95997 202 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 ZP3P21754 424 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 GPR183P32249 361 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP39-205ENST00000442708 SYNJ2BPP57105 145 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 ID3Q02535 119 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 C2orf83Q53S99 150 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 SLC24A4Q8NFF2 622 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 HIPK2Q9H2X6 1198 aa12.26□□□□□ -0.45
USP39-205ENST00000442708 OR2T8A6NH00 312 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 SNRPGP15A8MWD9 76 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 SYNGR2O43760 224 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 PRAF2O60831 178 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 NPY1RP25929 384 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 POLR2GP62487 172 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP39-205ENST00000442708 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 IL34Q6ZMJ4 242 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
USP39-205ENST00000442708 GPN1Q9HCN4 374 aaPredicted RBP12.25□□□□□ -0.45
USP39-205ENST00000442708 IGHV3-35A0A0C4DH35 117 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 C15orf62A8K5M9 175 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 FAM25EA8MYX2 175 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 WRBO00258 174 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
USP39-205ENST00000442708 TMEM50AO95807 157 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 IFNA10P01566 189 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 ADMP35318 185 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 DCTN2Q13561 401 aaKnown RBP12.24□□□□□ -0.45
USP39-205ENST00000442708 BEAN1Q3B7T3 259 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 GSKIPQ9P0R6 139 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 U3KQ87 197 aa12.24□□□□□ -0.45
USP39-205ENST00000442708 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 SEC14L6B5MCN3 397 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 TGOLN2O43493 480 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 MED6O75586 246 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 SIX6O95475 246 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 MBPP02686 304 aaPredicted RBP12.23□□□□□ -0.45
USP39-205ENST00000442708 CTSGP08311 255 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 EDN2P20800 178 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 NKX2-1P43699 371 aaPredicted RBP12.23□□□□□ -0.45
USP39-205ENST00000442708 MFAP4P55083 255 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 Q56UQ5 140 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 FAM209BQ5JX69 171 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 ACSM6Q6P461 480 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 UBAC2Q8NBM4 344 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
USP39-205ENST00000442708 RCL1Q9Y2P8 373 aaKnown RBP12.23□□□□□ -0.45
USP39-205ENST00000442708 CORTO00230 105 aa12.22□□□□□ -0.45
USP39-205ENST00000442708 SSSCA1O60232 199 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms