RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GPHA2Q96T91 129 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 C20orf24Q9BUV8 137 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 COMMD3Q9UBI1 195 aa5.83□□□□□ -1.48
CD44-211ENST00000442151 KLK5Q9Y337 293 aaPredicted RBP5.83□□□□□ -1.48
CD44-211ENST00000442151 TNCP24821 2201 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 TRAV14DV4A0A0A6YYC5 116 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 TRAV3A0A0B4J244 114 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 TMEM238LA0A1B0GVL6 79 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 A0A1B0GW64 132 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 A0A1W2PS18 150 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 C15orf61A6NNL5 157 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 GNG7O60262 68 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 FCER2P06734 321 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 HLA-DMAP28067 261 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 HRH1P35367 487 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 EIF2B2P49770 351 aaKnown RBP5.82□□□□□ -1.48
CD44-211ENST00000442151 RND3P61587 244 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 LSM3P62310 102 aaKnown RBP5.82□□□□□ -1.48
CD44-211ENST00000442151 RNASE10Q5GAN6 216 aaKnown RBP5.82□□□□□ -1.48
CD44-211ENST00000442151 TBC1D26Q86UD7 250 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 NOXA1Q86UR1 476 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 ARRDC1Q8N5I2 433 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 UBAC2Q8NBM4 344 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 TMEM116Q8NCL8 245 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 OR10W1Q8NGF6 305 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 TMEM14BQ9NUH8 114 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 SMPXQ9UHP9 88 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 S4R3C0 116 aa5.82□□□□□ -1.48
CD44-211ENST00000442151 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 YIF1AO95070 293 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 ZNF182P17025 639 aaPredicted RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 MRPS10P82664 201 aaKnown RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 PRCDQ00LT1 54 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 SSBP1Q04837 148 aaKnown RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 WT1-ASQ06250 92 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 PHLDA2Q53GA4 152 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 LYSMD2Q8IV50 215 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 CENPSQ8N2Z9 138 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 ZNF114Q8NC26 417 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 CHAC2Q8WUX2 184 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 CACNG8Q8WXS5 425 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 RRNAD1Q96FB5 475 aaKnown RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 MISP3Q96FF7 219 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 COPZ2Q9P299 210 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 TRAV30A0A087WSZ9 112 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 RPS10-NUDT3A0A1W2PQS6 291 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 DFFBO76075 338 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 IFNA17P01571 189 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 ADMP35318 185 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 TMEM41BQ5BJD5 291 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 UNQ9165/PRO28630Q6UXU0 137 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 SNX29P2Q8IUI4 249 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 SLC35G3Q8N808 338 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 RNASE11Q8TAA1 199 aaKnown RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 GATAD1Q8WUU5 269 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 SCGB3A2Q96PL1 93 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 OVOL2Q9BRP0 275 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 FXYD6Q9H0Q3 95 aa5.81□□□□□ -1.48
CD44-211ENST00000442151 MRPL18Q9H0U6 180 aaKnown RBP5.81□□□□□ -1.48
CD44-211ENST00000442151 TRAV2A0A0B4J234 112 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 IGHV7-4-1A0A0J9YVY3 117 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 MPTX1A8MV57 137 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 INS-IGF2F8WCM5 200 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 DNASE2O00115 360 aaPredicted RBP5.8□□□□□ -1.48
CD44-211ENST00000442151 CTSDP07339 412 aaPredicted RBP5.8□□□□□ -1.48
CD44-211ENST00000442151 TAS2R19P59542 299 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 DHODHQ02127 395 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 TNFRSF9Q07011 255 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 MEF2DQ14814 521 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 TRIM16LQ309B1 348 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 C19orf35Q6ZS72 473 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 FAM219AQ8IW50 185 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 TMEM229BQ8NBD8 167 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 GRAMD2BQ96HH9 432 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 SEC22AQ96IW7 307 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 FUNDC2Q9BWH2 189 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 RHPN1-AS1Q9BWJ2 59 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 NXF2Q9GZY0 626 aaKnown RBP5.8□□□□□ -1.48
CD44-211ENST00000442151 MFFQ9GZY8 342 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 NSG2Q9Y328 171 aa5.8□□□□□ -1.48
CD44-211ENST00000442151 IGHV3-35A0A0C4DH35 117 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 CXorf65A6NEN9 183 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 K7EIM0 57 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 MT-CO2P00403 227 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 CTSGP08311 255 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 ELK1P19419 428 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 NPPCP23582 126 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 AKR1C2P52895 323 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 C4orf46Q504U0 113 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 ETFRF1Q6IPR1 90 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 ZNF600Q6ZNG1 722 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 TERB2Q8NHR7 220 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 RNF183Q96D59 192 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 OR10C1Q96KK4 312 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 CSTL1Q9H114 145 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 RETNQ9HD89 108 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 C14orf166Q9Y224 244 aaKnown RBP5.79□□□□□ -1.48
CD44-211ENST00000442151 KCNIP3Q9Y2W7 256 aa5.79□□□□□ -1.48
CD44-211ENST00000442151 C3orf85A0A1B0GTC6 90 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms