RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZNF718Q3SXZ3 478 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 C12orf54Q6X4T0 127 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 DEFB125Q8N687 156 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 OR10D3Q8NH80 312 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 GALMQ96C23 342 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 ASCL2Q99929 193 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 ABI3Q9P2A4 366 aa6.23□□□□□ -1.41
HDAC9-214ENST00000441542 TPRP12270 2363 aaKnown RBP6.23□□□□□ -1.41
HDAC9-214ENST00000441542 EML6Q6ZMW3 1958 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 TMEM131Q92545 1883 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 A0A1W2PPC4 97 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 ZNF503-AS2A6NEH8 195 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 MRPL33O75394 65 aaKnown RBP6.22□□□□□ -1.41
HDAC9-214ENST00000441542 HBZP02008 142 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 RPS20P60866 119 aaKnown RBP6.22□□□□□ -1.41
HDAC9-214ENST00000441542 GNG5P63218 68 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 RHOGP84095 191 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 JMJD8Q96S16 334 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 PILRBQ9UKJ0 227 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 CHCHD2Q9Y6H1 151 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-214ENST00000441542 YLPM1P49750 1951 aaKnown RBP6.22□□□□□ -1.41
HDAC9-214ENST00000441542 LILRA5A6NI73 299 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 C2orf70A6NJV1 201 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 RFPL3SP0C7P2 107 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 HIST1H1EP10412 219 aaKnown RBP6.22□□□□□ -1.41
HDAC9-214ENST00000441542 ARR3P36575 388 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 CLDN18P56856 261 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 PCBD1P61457 104 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 PSG3Q16557 428 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 C3AR1Q16581 482 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 Q8N7P7 452 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 SAP30LQ9HAJ7 183 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 GNG12Q9UBI6 72 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 FZR1Q9UM11 496 aa6.22□□□□□ -1.41
HDAC9-214ENST00000441542 TRBV9A0A0B4J1U6 114 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 HIGD1CA8MV81 97 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 ALKBH6Q3KRA9 238 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 OR4S2Q8NH73 311 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 BLNKQ8WV28 456 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 TMEM191AQ9H0A3 160 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 NPVFQ9HCQ7 196 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 YAE1D1Q9NRH1 226 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 TNCP24821 2201 aa6.21□□□□□ -1.41
HDAC9-214ENST00000441542 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.41
HDAC9-214ENST00000441542 MUC6Q6W4X9 2439 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 GGTLC3B5MD39 225 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 FAM90A26D6RGX4 464 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 SYS1-DBNDD2H3BUS1 97 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 PSPNO60542 156 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 P04436 131 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 IGLC1P0CG04 106 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 PYYP10082 97 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 LIFP15018 202 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 AZU1P20160 251 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 BRWD1-AS2P59051 145 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 HERV-K104P63124 156 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 GNG3P63215 75 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 RPL39P5Q59GN2 51 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 Q6ZR03 302 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 SCCPDHQ8NBX0 429 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 NUP35Q8NFH5 326 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 DUSP13Q9UII6 198 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 PLCE1Q9P212 2302 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 TRGV10A0A0A0MS01 117 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 A0A1W2PRE2 83 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 ISLRO14498 428 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 UBE2L3P68036 154 aaKnown RBP6.21□□□□□ -1.42
HDAC9-214ENST00000441542 TMEM249Q2WGJ8 235 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 SLC25A53Q5H9E4 307 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 ZNF788Q6ZQV5 615 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 ZNF645Q8N7E2 425 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 SH2D2AQ9NP31 389 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 ENY2Q9NPA8 101 aa6.21□□□□□ -1.42
HDAC9-214ENST00000441542 ROS1P08922 2347 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 PPIAL4CA0A0B4J2A2 164 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 IZUMO1RA6ND01 250 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 PPIAL4GP0DN37 164 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 GDF1P27539 372 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 OPRK1P41145 380 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 ATP5J2P56134 94 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 ERVK-16P61578 105 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 PLP2Q04941 152 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 RAB31Q13636 194 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 TRIP6Q15654 476 aaKnown RBP6.2□□□□□ -1.42
HDAC9-214ENST00000441542 LYSMD4Q5XG99 296 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 FAM71F2Q6NXP2 309 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 SPEM1Q8N4L4 309 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 SNRNP40Q96DI7 357 aaKnown RBP6.2□□□□□ -1.42
HDAC9-214ENST00000441542 SPCS1Q9Y6A9 102 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 SPAARA0A1B0GVQ0 90 aa6.2□□□□□ -1.42
HDAC9-214ENST00000441542 GPR12P47775 334 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms