RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 FGF8P55075 233 aaPredicted RBP7.4□□□□□ -1.22
HDAC6-209ENST00000440653 B2MP61769 119 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 ERHP84090 104 aaKnown RBP7.4□□□□□ -1.22
HDAC6-209ENST00000440653 SRSF2Q01130 221 aaKnown RBP7.4□□□□□ -1.22
HDAC6-209ENST00000440653 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 HNF4GQ14541 408 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 C11orf71Q6IPW1 123 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 TMEM144Q7Z5S9 345 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 ABHD12Q8N2K0 398 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 PNKDQ8N490 385 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 KIR3DL3Q8N743 410 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 Q8N7P7 452 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 RNASEH2CQ8TDP1 164 aaKnown RBP7.4□□□□□ -1.22
HDAC6-209ENST00000440653 CACNG8Q8WXS5 425 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 HIST1H2BAQ96A08 127 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 RNF2Q99496 336 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 MGST2Q99735 147 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 CHODLQ9H9P2 273 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
HDAC6-209ENST00000440653 COLCA2A8K830 154 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 M0R1W7 72 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 CORTO00230 105 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 VENTXO95231 258 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 OR2C1O95371 312 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 PLAUP00749 431 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 LIPFP07098 398 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 STAG3L2P0CL84 134 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 STAG3L3P0CL85 134 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-209ENST00000440653 CEBPGP53567 150 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 PAX2Q02962 417 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 AKIRIN2Q53H80 203 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-209ENST00000440653 UTF1Q5T230 341 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 C1QL4Q86Z23 238 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 MMD2Q8IY49 270 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 TEX45Q8NA69 505 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 ZNF114Q8NC26 417 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 C22orf15Q8WYQ4 148 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 RNF5Q99942 180 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
HDAC6-209ENST00000440653 HINT2Q9BX68 163 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 MRPL32Q9BYC8 188 aaKnown RBP7.39□□□□□ -1.23
HDAC6-209ENST00000440653 NDUFA4L2Q9NRX3 87 aa7.39□□□□□ -1.23
HDAC6-209ENST00000440653 PPIAL4CA0A0B4J2A2 164 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 TEX50A0A1B0GTY4 177 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 IGLV1-47P01700 117 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PPIAL4GP0DN37 164 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 RNASE2P10153 161 aaKnown RBP7.38□□□□□ -1.23
HDAC6-209ENST00000440653 RAB5AP20339 215 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 CEACAM3P40198 252 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 COMPP49747 757 aaPredicted RBP7.38□□□□□ -1.23
HDAC6-209ENST00000440653 TAS2R45P59539 299 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 RPS16P62249 146 aaKnown RBP7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRR20EP86478 221 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRR20CP86479 221 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRR20DP86480 221 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRR20BP86481 221 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRR20AP86496 221 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 CD69Q07108 199 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 WDR25Q64LD2 544 aaPredicted RBP7.38□□□□□ -1.23
HDAC6-209ENST00000440653 ETFRF1Q6IPR1 90 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 ZNF841Q6ZN19 808 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 STPG3Q8N7X2 389 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 BTF3L4Q96K17 158 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 C20orf24Q9BUV8 137 aa7.38□□□□□ -1.23
HDAC6-209ENST00000440653 PRKDCP78527 4128 aaKnown RBP7.38□□□□□ -1.23
HDAC6-209ENST00000440653 A6NNC1 897 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 SRRM4A7MD48 611 aaKnown RBP7.37□□□□□ -1.23
HDAC6-209ENST00000440653 C11orf94C9JXX5 98 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 CLDN34H7C241 214 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 CLN5O75503 358 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 YIF1AO95070 293 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 IGLV2-23P01705 113 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 OPN1MWP04001 364 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 CRYBA1P05813 215 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 FBP1P09467 338 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 OPN1MW2P0DN77 364 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 OPN1MW3P0DN78 364 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 RND2P52198 227 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 BPIFB3P59826 476 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 CD81P60033 236 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 SELENOTP62341 195 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 IQCF2Q8IXL9 164 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 LY6G5BQ8NDX9 201 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 OR4F5Q8NH21 305 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 RPEQ96AT9 228 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 YPEL4Q96NS1 127 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 OR4F4Q96R69 305 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 PFDN5Q99471 154 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 SSX3Q99909 188 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 KRTAP17-1Q9BYP8 105 aa7.37□□□□□ -1.23
HDAC6-209ENST00000440653 SDF2L1Q9HCN8 221 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms