RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CA7P43166 264 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 TCF15Q12870 199 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 NMSQ5H8A3 153 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 CRIM1Q9NZV1 1036 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 COL4A3Q01955 1670 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 CEP295Q9C0D2 2601 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 ATP5G3P48201 142 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 ZNF738Q8NE65 137 aa10.17□□□□□ -0.78
TCOF1-205ENST00000439160 LINC00473A8K010 186 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 DKK1O94907 266 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 TRGV3P03979 118 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
TCOF1-205ENST00000439160 CFPP27918 469 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM177Q53S58 311 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 MRPL32Q9BYC8 188 aaKnown RBP10.16□□□□□ -0.78
TCOF1-205ENST00000439160 AUP1Q9Y679 476 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 IGHV3-66A0A0C4DH42 116 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 HAX1O00165 279 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 CD81P60033 236 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 CENPWQ5EE01 88 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 GCSAMLQ5JQS6 135 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 C21orf62Q9NYP8 219 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 NCOA6Q14686 2063 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-205ENST00000439160 TCAPO15273 167 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 NBR2O15453 112 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 SPANXN1Q5VSR9 72 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 Q6ZR03 302 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 IGKV1-6A0A0C4DH72 117 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 A0A1W2PNU3 283 aaPredicted RBP10.16□□□□□ -0.78
TCOF1-205ENST00000439160 AMY1AP04745 511 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 NPPCP23582 126 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 GPR183P32249 361 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 CCL20P78556 96 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 NUP37Q8NFH4 326 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 PRO3102Q9H379 93 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 RFNGQ9Y644 331 aa10.16□□□□□ -0.78
TCOF1-205ENST00000439160 A0A1W2PS18 150 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 ICAM4Q14773 271 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 VAMP3Q15836 100 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 DMRTA2Q96SC8 542 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 GSN-AS1Q9NRJ2 163 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 DCAF16Q9NXF7 216 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 GOLT1BQ9Y3E0 138 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 FAM215AQ9Y5M1 114 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 TRBV6-6A0A0A6YYG2 114 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 E7EQL1 145 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 K7EM74 188 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 TRGC1P0CF51 173 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 PKIAP61925 76 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 LYPD2Q6UXB3 125 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 ST6GALNAC3Q8NDV1 305 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 GAFA1Q96PS6 74 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 ARFGEF3Q5TH69 2177 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 IGHV1-8P0DP01 117 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 ID1P41134 155 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 CLDND2Q8NHS1 167 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 SLC25A33Q9BSK2 321 aa10.15□□□□□ -0.78
TCOF1-205ENST00000439160 A0A0G2JRQ6 117 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 CXorf65A6NEN9 183 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 PRSS1P07477 247 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 CDX1P47902 265 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 VSIRQ9H7M9 311 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 MGPP08493 103 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 FAM106AQ4KMX7 169 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 FAM169BQ8N8A8 192 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 RNASEH2CQ8TDP1 164 aaKnown RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 CYTL1Q9NRR1 136 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 YTHDF2Q9Y5A9 579 aaKnown RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 IGHV2-26A0A0B4J1V2 119 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 M0R143 59 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 COL8A2P25067 703 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 PRCDQ00LT1 54 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 CENPVQ7Z7K6 275 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 PGLYRP4Q96LB8 373 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 MYO18BQ8IUG5 2567 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 Q6ZRM9 215 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 WDR86Q86TI4 376 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 OR4B1Q8NGF8 309 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 RNF138Q8WVD3 245 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 SLX1AQ9BQ83 275 aa10.14□□□□□ -0.79
TCOF1-205ENST00000439160 SONP18583 2426 aaKnown RBP10.14□□□□□ -0.79
TCOF1-205ENST00000439160 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 MYOD1P15172 320 aa10.13□□□□□ -0.79
TCOF1-205ENST00000439160 KLRD1Q13241 179 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms