RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 FOXI3A8MTJ6 420 aaPredicted RBP9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 E9PQ18 207 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 ATXN7O15265 892 aaPredicted RBP9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 CLPSP04118 112 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 CEACAM1P13688 526 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 NMSQ5H8A3 153 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 TEX45Q8NA69 505 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 C18orf15Q96N68 181 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 RFNGQ9Y644 331 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 FHL1Q13642 323 aa9.35□□□□□ -0.91
SEMA4D-211ENST00000438547 DOPEY2Q9Y3R5 2298 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 COX6CP09669 75 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 SP9P0CG40 484 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 ADCYAP1P18509 176 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 PYY3Q5JQD4 70 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 KIAA2026Q5HYC2 2103 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 DUTP33316 252 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 PNRC2Q9NPJ4 139 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 A6NNC1 897 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 OR9G9P0C7N8 305 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 SAA1P0DJI8 122 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 NPPCP23582 126 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 MEF2CQ06413 473 aaPredicted RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 EFNB3Q15768 340 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 PHF3Q92576 2039 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 LOC105371242A0A075B767 164 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 PRSS2P07478 247 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 OR11H1Q8NG94 326 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 TMEM160Q9NX00 188 aa9.34□□□□□ -0.91
SEMA4D-211ENST00000438547 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 B9A039 149 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 TFF1P04155 84 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 FOXG1P55316 489 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 SYT8Q8NBV8 401 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 LINC00312Q9Y6C7 94 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 IGHV3OR16-13A0A075B7E8 117 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 IGHV3-74A0A0B4J1X5 117 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 LYL1P12980 280 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 Q9H3A6 140 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 GPX1P07203 203 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 HGFACQ04756 655 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 SSBP4Q9BWG4 385 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 CLDN16Q9Y5I7 305 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 S4R3C0 116 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 C17orf82Q86X59 251 aaPredicted RBP9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 C9orf106Q8NAJ2 232 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
SEMA4D-211ENST00000438547 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 DLX6P56179 175 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 HIST1H1AQ02539 215 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 DPM3Q9P2X0 92 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 CACNA1GO43497 2377 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 NPIPB6E9PJ23 425 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 Q6AWC8 147 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 IGKV3D-15A0A087WSY6 115 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 A0A1B0GW15 77 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 PINLYPA6NC86 204 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 CCL3L1P16619 93 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 TIMP3P35625 211 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 GNG5P63218 68 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 CD69Q07108 199 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 CIARTQ8N365 385 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 ELOVL5Q9NYP7 299 aa9.32□□□□□ -0.92
SEMA4D-211ENST00000438547 DLEU1O43261 78 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 ACACAQ13085 2346 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 RLFQ13129 1914 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 PYYP10082 97 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 FOXL1Q12952 345 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 C5orf24Q7Z6I8 188 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 GGNQ86UU5 652 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
SEMA4D-211ENST00000438547 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms