RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ELOVL5Q9NYP7 299 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 CRIM1Q9NZV1 1036 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 PCNX1Q96RV3 2341 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 H3BTX0 84 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 MOSP00540 346 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 NBEAP1P0C6P0 100 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 HBBP68871 147 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 KRTCAP3Q53RY4 240 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 BPIFA4PQ86YQ2 179 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 OR8B3Q8NGG8 313 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 KCNS1Q96KK3 526 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 OR8B2Q96RD0 313 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 MGST2Q99735 147 aa5.55□□□□□ -1.52
CSDE1-205ENST00000438362 IZUMO1RA6ND01 250 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 FAM90A27PA6NNH2 459 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 SAA1P0DJI8 122 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 FOXA3P55318 350 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 PRCDQ00LT1 54 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 RELBQ01201 579 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 C1orf194Q5T5A4 169 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 OR8A1Q8NGG7 326 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 GNB1LQ9BYB4 327 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 SEPSECSQ9HD40 501 aaKnown RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 FREM1Q5H8C1 2179 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 IGHV1-18A0A0C4DH31 117 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 IGKV1D-33P01593 117 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 IGKV1-33P01594 117 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 BTF3P20290 206 aaKnown RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 COMPP49747 757 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 SLC25A34Q6PIV7 304 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 C12orf54Q6X4T0 127 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 SNRNP40Q96DI7 357 aaKnown RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 MRPL20Q9BYC9 149 aaKnown RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 C9JCJ5 164 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 MLNRO43193 412 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 GFRA3O60609 400 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 PRSS1P07477 247 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 CD69Q07108 199 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 PEAR1Q5VY43 1037 aaPredicted RBP5.54□□□□□ -1.52
CSDE1-205ENST00000438362 SPATA31B1PQ5VZV4 182 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 CYB5R2Q6BCY4 276 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 HAPLN4Q86UW8 402 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 CD177Q8N6Q3 437 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 MDS2Q8NDY4 140 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 TMEM70Q9BUB7 260 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 RAB1BQ9H0U4 201 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 LINC00312Q9Y6C7 94 aa5.54□□□□□ -1.52
CSDE1-205ENST00000438362 TRAV3A0A0B4J244 114 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF503-AS2A6NEH8 195 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 TNFSF13O75888 250 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 ORM1P02763 201 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 S100A4P26447 101 aaKnown RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 FAM27E3Q08E93 113 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF124Q15973 351 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 RNASEH2CQ8TDP1 164 aaKnown RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 SRSF12Q8WXF0 261 aaKnown RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 INTS1Q8N201 2190 aaKnown RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 J3QR89 54 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF324O75467 553 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 SELLP14151 372 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 CD40P25942 277 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 KIR2DL2P43627 348 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 PPOXP50336 477 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 MEF2CQ06413 473 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 GOLT1AQ6ZVE7 132 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 PRDM13Q9H4Q3 707 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 FOXA2Q9Y261 457 aaPredicted RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 A8MWP6 167 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 LMO1P25800 156 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 NUTF2P61970 127 aaKnown RBP5.53□□□□□ -1.52
CSDE1-205ENST00000438362 COTL1Q14019 142 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 GTF2H5Q6ZYL4 71 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 ZNF257Q9Y2Q1 563 aa5.53□□□□□ -1.52
CSDE1-205ENST00000438362 DNAH12Q6ZR08 3092 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 A6NDN8 102 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 HIGD1CA8MV81 97 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 HLA-DRB1P01911 266 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 ERVK11-1P61568 191 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 GPR82Q96P67 336 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 LY96Q9Y6Y9 160 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 DENND4AQ7Z401 1863 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 LOC389332A0A1B0GUA5 103 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 TMEM189A5PLL7 270 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 TYMSP04818 313 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 LIPFP07098 398 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 AREGP15514 252 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 CCL3L1P16619 93 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 OR10J3Q5JRS4 329 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 DMRTA1Q5VZB9 504 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 PET117Q6UWS5 81 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 WDR86Q86TI4 376 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 NEU1Q99519 415 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 C1RLQ9NZP8 487 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 RPUSD1Q9UJJ7 312 aaKnown RBP5.52□□□□□ -1.53
CSDE1-205ENST00000438362 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
CSDE1-205ENST00000438362 CEP350Q5VT06 3117 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms