RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
CALD1-209ENST00000436461 RANGRFQ9HD47 186 aaPredicted RBP13.04□□□□□ -0.32
CALD1-209ENST00000436461 U3KQ87 197 aa13.04□□□□□ -0.32
CALD1-209ENST00000436461 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 H3BUA1 57 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 L7N2F9 121 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 BCAP31P51572 246 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 VAMP2P63027 116 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 C15orf32Q32M92 178 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 C2orf83Q53S99 150 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 RNF152Q8N8N0 203 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 SMIM8Q96KF7 97 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 SLA2Q9H6Q3 261 aa13.03□□□□□ -0.32
CALD1-209ENST00000436461 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.32
CALD1-209ENST00000436461 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.32
CALD1-209ENST00000436461 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.32
CALD1-209ENST00000436461 OR2T35Q8NGX2 323 aa13.02□□□□□ -0.32
CALD1-209ENST00000436461 MYOZ3Q8TDC0 251 aa13.02□□□□□ -0.32
CALD1-209ENST00000436461 MBD2Q9UBB5 411 aa13.02□□□□□ -0.32
CALD1-209ENST00000436461 G3V3Q6 166 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 K7EIM0 57 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 MT-CO2P00403 227 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 IFNA4P05014 189 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 METTL15P1P0C7V9 234 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 CAV2P51636 162 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 NECAP1Q8NC96 275 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 CITED1Q99966 193 aa13.02□□□□□ -0.33
CALD1-209ENST00000436461 FNDC4Q9H6D8 234 aaPredicted RBP13.02□□□□□ -0.33
CALD1-209ENST00000436461 STRAPQ9Y3F4 350 aaKnown RBP13.02□□□□□ -0.33
CALD1-209ENST00000436461 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 I3L2K1 104 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 BRI3O95415 125 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 OR8U8P0C7N1 319 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
CALD1-209ENST00000436461 PVALBP20472 110 aaPredicted RBP13.01□□□□□ -0.33
CALD1-209ENST00000436461 OPRK1P41145 380 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 RAP2BP61225 183 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 RPL23AP62750 156 aaKnown RBP13.01□□□□□ -0.33
CALD1-209ENST00000436461 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 PVRIGQ6DKI7 326 aa13.01□□□□□ -0.33
CALD1-209ENST00000436461 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
CALD1-209ENST00000436461 FAM223BA6NKX1 122 aa13□□□□□ -0.33
CALD1-209ENST00000436461 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
CALD1-209ENST00000436461 TSC22D2O75157 780 aa13□□□□□ -0.33
CALD1-209ENST00000436461 RLN2P04090 185 aa13□□□□□ -0.33
CALD1-209ENST00000436461 ATP5G2Q06055 141 aa13□□□□□ -0.33
CALD1-209ENST00000436461 CD300CQ08708 224 aa13□□□□□ -0.33
CALD1-209ENST00000436461 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
CALD1-209ENST00000436461 KLK9Q2XQG4 91 aa13□□□□□ -0.33
CALD1-209ENST00000436461 OR8G2PQ6IF36 304 aa13□□□□□ -0.33
CALD1-209ENST00000436461 PRSS54Q6PEW0 395 aa13□□□□□ -0.33
CALD1-209ENST00000436461 TMEM14EPQ6UXP3 125 aa13□□□□□ -0.33
CALD1-209ENST00000436461 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
CALD1-209ENST00000436461 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
CALD1-209ENST00000436461 KLHL30-AS1Q8NEE0 82 aa13□□□□□ -0.33
CALD1-209ENST00000436461 OR1L6Q8NGR2 347 aa13□□□□□ -0.33
CALD1-209ENST00000436461 SCARB1Q8WTV0 552 aa13□□□□□ -0.33
CALD1-209ENST00000436461 ST6GAL2Q96JF0 529 aa13□□□□□ -0.33
CALD1-209ENST00000436461 ZFP57Q9NU63 452 aa13□□□□□ -0.33
CALD1-209ENST00000436461 THYN1Q9P016 225 aa13□□□□□ -0.33
CALD1-209ENST00000436461 KLK9Q9UKQ9 250 aa13□□□□□ -0.33
CALD1-209ENST00000436461 TSSC4Q9Y5U2 329 aaPredicted RBP13□□□□□ -0.33
CALD1-209ENST00000436461 IGSF23A1L1A6 192 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 ANKRD34BA5PLL1 514 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 PMS2P5A8MQ11 134 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 E5RGE8 158 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 CYB5BO43169 146 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 CST7O76096 145 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 TAS2R30P59541 319 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 RAB11AP62491 216 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 ARL16Q0P5N6 197 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 C8orf86Q6ZUL3 223 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 UBAC2Q8NBM4 344 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 DCUN1D4Q92564 292 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 DUX3Q96PT4 197 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 ZNF747Q9BV97 191 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 ZC4H2Q9NQZ6 224 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
CALD1-209ENST00000436461 ANK2Q01484 3957 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 NUDT19A8MXV4 375 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 PET100P0DJ07 73 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 RPP30P78346 268 aaKnown RBP12.99□□□□□ -0.33
CALD1-209ENST00000436461 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 CCDC140Q96MF4 163 aa12.99□□□□□ -0.33
CALD1-209ENST00000436461 TRRAPQ9Y4A5 3859 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 A0A0G2JLM5 398 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 PRSS46E5RG02 174 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 CORTO00230 105 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
CALD1-209ENST00000436461 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 TMEM252Q8N6L7 170 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 THAP6Q8TBB0 222 aa12.98□□□□□ -0.33
CALD1-209ENST00000436461 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms