RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SLC38A11Q08AI6 406 aa18.09■□□□□ 0.49
CPSF4-204ENST00000436336 RNASEH2CQ8TDP1 164 aaKnown RBP18.09■□□□□ 0.49
CPSF4-204ENST00000436336 G3V318 75 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 CORTO00230 105 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 MFAP2P55001 183 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 ATP6V1FQ16864 119 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 C19orf54Q5BKX5 351 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 C19orf35Q6ZS72 473 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 LILRB2Q8N423 598 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 ZNF702PQ9H963 129 aa18.08■□□□□ 0.48
CPSF4-204ENST00000436336 FAM181BA6NEQ2 426 aa18.07■□□□□ 0.48
CPSF4-204ENST00000436336 SLC25A24Q6NUK1 477 aa18.07■□□□□ 0.48
CPSF4-204ENST00000436336 OR5T1Q8NG75 326 aa18.07■□□□□ 0.48
CPSF4-204ENST00000436336 CYB5BO43169 146 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 DFFBO76075 338 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 UBA52P62987 128 aaKnown RBP18.06■□□□□ 0.48
CPSF4-204ENST00000436336 CLINT1Q14677 625 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 Q8N2B8 174 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 GGACTQ9BVM4 153 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 LINC00527Q9UJ94 153 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 DMRT1Q9Y5R6 373 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 FN1P02751 2386 aaKnown RBP18.06■□□□□ 0.48
CPSF4-204ENST00000436336 ARSJQ5FYB0 599 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-204ENST00000436336 ATP5SQ99766 215 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 WFDC1Q9HC57 220 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 CYTL1Q9NRR1 136 aa18.06■□□□□ 0.48
CPSF4-204ENST00000436336 DLK1P80370 383 aa18.05■□□□□ 0.48
CPSF4-204ENST00000436336 CD69Q07108 199 aa18.05■□□□□ 0.48
CPSF4-204ENST00000436336 MISP3Q96FF7 219 aa18.05■□□□□ 0.48
CPSF4-204ENST00000436336 NOL4LQ96MY1 436 aaPredicted RBP18.05■□□□□ 0.48
CPSF4-204ENST00000436336 IGLV11-55A0A075B6I3 123 aa18.04■□□□□ 0.48
CPSF4-204ENST00000436336 TSPAN9O75954 239 aa18.04■□□□□ 0.48
CPSF4-204ENST00000436336 GPX4P36969 197 aaPredicted RBP18.04■□□□□ 0.48
CPSF4-204ENST00000436336 EXOSC2Q13868 293 aaKnown RBP18.04■□□□□ 0.48
CPSF4-204ENST00000436336 ZNF266Q14584 549 aa18.04■□□□□ 0.48
CPSF4-204ENST00000436336 KLK9Q2XQG4 91 aa18.04■□□□□ 0.48
CPSF4-204ENST00000436336 ZNF471Q9BX82 626 aaPredicted RBP18.04■□□□□ 0.48
CPSF4-204ENST00000436336 KLK9Q9UKQ9 250 aa18.04■□□□□ 0.48
CPSF4-204ENST00000436336 TCF21O43680 179 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 PRH1P02810 166 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 HIST1H1BP16401 226 aaKnown RBP18.03■□□□□ 0.48
CPSF4-204ENST00000436336 PPIFP30405 207 aaKnown RBP18.03■□□□□ 0.48
CPSF4-204ENST00000436336 OPRK1P41145 380 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 VWC2Q2TAL6 325 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 TMEM95Q3KNT9 176 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 SLC51BQ86UW2 128 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 CACNG8Q8WXS5 425 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 FANCD2OSQ96PS1 177 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 TMEM147Q9BVK8 224 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 GON7Q9BXV9 100 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 THYN1Q9P016 225 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 FNDC10F2Z333 226 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 JTBO76095 146 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 CRYBA1P05813 215 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 RPL7L1Q6DKI1 246 aaKnown RBP18.03■□□□□ 0.48
CPSF4-204ENST00000436336 ETFRF1Q6IPR1 90 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 UQCC1Q9NVA1 299 aa18.03■□□□□ 0.48
CPSF4-204ENST00000436336 BORCS7-ASMTA0A0B4J1R7 106 aa18.02■□□□□ 0.48
CPSF4-204ENST00000436336 FNDC4Q9H6D8 234 aaPredicted RBP18.02■□□□□ 0.48
CPSF4-204ENST00000436336 CUBNO60494 3623 aa18.02■□□□□ 0.48
CPSF4-204ENST00000436336 RPS10-NUDT3A0A1W2PQS6 291 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 SOX15O60248 233 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 CFHR3Q02985 330 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 Q6ZSV7 163 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 SLC16A13Q7RTY0 426 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 UBAC2Q8NBM4 344 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 ZNF355PQ9NSJ1 428 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 H3BUA1 57 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 BRI3O95415 125 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 MT-CO2P00403 227 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 EIF5AP63241 154 aaKnown RBP18.01■□□□□ 0.47
CPSF4-204ENST00000436336 MLANAQ16655 118 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 OR2T6Q8NHC8 308 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 NPVFQ9HCQ7 196 aa18.01■□□□□ 0.47
CPSF4-204ENST00000436336 I3L2K1 104 aa18■□□□□ 0.47
CPSF4-204ENST00000436336 IFNA5P01569 189 aa18■□□□□ 0.47
CPSF4-204ENST00000436336 STOML3Q8TAV4 291 aa18■□□□□ 0.47
CPSF4-204ENST00000436336 SLC35E1Q96K37 410 aa18■□□□□ 0.47
CPSF4-204ENST00000436336 TRBV9A0A0B4J1U6 114 aa17.99■□□□□ 0.47
CPSF4-204ENST00000436336 UBE2L5PA0A1B0GUS4 154 aa17.99■□□□□ 0.47
CPSF4-204ENST00000436336 SMCO3A2RU48 225 aa17.99■□□□□ 0.47
CPSF4-204ENST00000436336 PARD6GQ9BYG4 376 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-204ENST00000436336 K7EIM0 57 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 OR2J3O76001 311 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 TPT1P13693 172 aaKnown RBP17.98■□□□□ 0.47
CPSF4-204ENST00000436336 GAMTQ14353 236 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 SERTAD4Q9NUC0 356 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 IGLV1-40P01703 118 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 TREML4Q6UXN2 200 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 ST8SIA2Q92186 375 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 WDR61Q9GZS3 305 aaKnown RBP17.98■□□□□ 0.47
CPSF4-204ENST00000436336 FBXL7Q9UJT9 491 aa17.98■□□□□ 0.47
CPSF4-204ENST00000436336 MDKP21741 143 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-204ENST00000436336 SLC35B1P78383 322 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 AKR1C1Q04828 323 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 BAP18Q8IXM2 172 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 NECAP1Q8NC96 275 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 SCGB1C1Q8TD33 95 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 ARV1Q9H2C2 271 aa17.97■□□□□ 0.47
CPSF4-204ENST00000436336 WDR83OSQ9Y284 106 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms