RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
HMGN1-207ENST00000436324 MRPL27Q9P0M9 148 aaKnown RBP13.77□□□□□ -0.21
HMGN1-207ENST00000436324 GPR132Q9UNW8 380 aa13.77□□□□□ -0.21
HMGN1-207ENST00000436324 OR11H12B2RN74 326 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 I3L2K1 104 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 MT-CO2P00403 227 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 MFAP4P55083 255 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 ELLP55199 621 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-207ENST00000436324 MARC2Q969Z3 335 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 PRRT1Q99946 306 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 TMEM222Q9H0R3 208 aa13.76□□□□□ -0.21
HMGN1-207ENST00000436324 NDUFA4O00483 81 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 B3GALNT1O75752 331 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 CTSGP08311 255 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 SNCAP37840 140 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 HOXA1P49639 335 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-207ENST00000436324 SURF2Q15527 256 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-207ENST00000436324 Q6ZRM9 215 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 RBPMS2Q6ZRY4 209 aaKnown RBP13.75□□□□□ -0.21
HMGN1-207ENST00000436324 SELENOHQ8IZQ5 122 aaKnown RBP13.75□□□□□ -0.21
HMGN1-207ENST00000436324 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 OR52B4Q8NGK2 314 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 LHFPL5Q8TAF8 219 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 GLYATL2Q8WU03 294 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 SRD5A3Q9H8P0 318 aa13.75□□□□□ -0.21
HMGN1-207ENST00000436324 HUWE1Q7Z6Z7 4374 aaKnown RBP13.75□□□□□ -0.21
HMGN1-207ENST00000436324 NUPL2O15504 423 aaKnown RBP13.74□□□□□ -0.21
HMGN1-207ENST00000436324 CDS2O95674 445 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 PYDC2Q56P42 97 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 SLC16A13Q7RTY0 426 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 ATP6V0BQ99437 205 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 ENY2Q9NPA8 101 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
HMGN1-207ENST00000436324 PRR13Q9NZ81 148 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 SCP2D1Q9UJQ7 156 aa13.74□□□□□ -0.21
HMGN1-207ENST00000436324 RBMY1BA6NDE4 496 aaKnown RBP13.73□□□□□ -0.21
HMGN1-207ENST00000436324 RBMY1EA6NEQ0 496 aaKnown RBP13.73□□□□□ -0.21
HMGN1-207ENST00000436324 CRYM-AS1A6NIL9 109 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 YIF1AO95070 293 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 RBMY1DP0C7P1 496 aaKnown RBP13.73□□□□□ -0.21
HMGN1-207ENST00000436324 DHODHQ02127 395 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 TMEM268Q5VZI3 342 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 RBPMSQ93062 196 aaKnown RBP13.73□□□□□ -0.21
HMGN1-207ENST00000436324 SPATA25Q9BR10 227 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 RETNQ9HD89 108 aa13.73□□□□□ -0.21
HMGN1-207ENST00000436324 GAR1Q9NY12 217 aaKnown RBP13.73□□□□□ -0.21
HMGN1-207ENST00000436324 GNG7O60262 68 aa13.72□□□□□ -0.21
HMGN1-207ENST00000436324 RELQ04864 619 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-207ENST00000436324 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
HMGN1-207ENST00000436324 TXN2Q99757 166 aa13.72□□□□□ -0.21
HMGN1-207ENST00000436324 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 TRAV25A0A0B4J276 109 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 RNASE2P10153 161 aaKnown RBP13.71□□□□□ -0.21
HMGN1-207ENST00000436324 AKR1C4P17516 323 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 S100A5P33763 92 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 SUB1P53999 127 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGN1-207ENST00000436324 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-207ENST00000436324 FAM219AQ8IW50 185 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 MUC7Q8TAX7 377 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 TMEM230Q96A57 120 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 ZNF414Q96IQ9 312 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 SCGB3A2Q96PL1 93 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-207ENST00000436324 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
HMGN1-207ENST00000436324 INS-IGF2F8WCM5 200 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 K7EMT4 169 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 NXPH3O95157 252 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-207ENST00000436324 SPCS3P61009 180 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 DUSP18Q8NEJ0 188 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
HMGN1-207ENST00000436324 KCNIP3Q9Y2W7 256 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 V9GYH0 126 aa13.7□□□□□ -0.22
HMGN1-207ENST00000436324 C15orf62A8K5M9 175 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 C3orf84H3BNL1 204 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 NPBWR1P48145 328 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-207ENST00000436324 TMEM187Q14656 261 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 MLANAQ16655 118 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 LAMTOR1Q6IAA8 161 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 CITED4Q96RK1 184 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 FAM110AQ9BQ89 295 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 KRTAP3-3Q9BYR6 98 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 KRTAP3-2Q9BYR7 98 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 TMEM56-RWDD3S4R434 201 aa13.69□□□□□ -0.22
HMGN1-207ENST00000436324 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 CEBPZOSA8MTT3 80 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 FAUP35544 74 aaKnown RBP13.68□□□□□ -0.22
HMGN1-207ENST00000436324 TOMM5Q8N4H5 51 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 TMEM116Q8NCL8 245 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 TRIM63Q969Q1 353 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-207ENST00000436324 HIPK2Q9H2X6 1198 aa13.68□□□□□ -0.22
HMGN1-207ENST00000436324 HEYLQ9NQ87 328 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-207ENST00000436324 IGHV7-4-1A0A0J9YVY3 117 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms