RNA–Protein interactions for RNA: ENST00000435425.1

SHH-203, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-203ENST00000435425 K7EIL1 84 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 K7EIM0 57 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 ANXA7P20073 488 aaKnown RBP14.24□□□□□ -0.13
SHH-203ENST00000435425 ZNF846Q147U1 533 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 SMCO1Q147U7 214 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 Q56UQ5 140 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 NMSQ5H8A3 153 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 DEFB121Q5J5C9 76 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 PLET1Q6UQ28 207 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 ZNF114Q8NC26 417 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 OR52E5Q8NH55 327 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 OR1S1Q8NH92 325 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 HEYLQ9NQ87 328 aaPredicted RBP14.24□□□□□ -0.13
SHH-203ENST00000435425 PEMTQ9UBM1 199 aa14.24□□□□□ -0.13
SHH-203ENST00000435425 ZNF320A2RRD8 509 aa14.23□□□□□ -0.13
SHH-203ENST00000435425 C9orf170A2RU37 121 aa14.23□□□□□ -0.13
SHH-203ENST00000435425 MT-CO2P00403 227 aa14.23□□□□□ -0.13
SHH-203ENST00000435425 CSN3P07498 182 aa14.23□□□□□ -0.13
SHH-203ENST00000435425 HOXB5P09067 269 aa14.23□□□□□ -0.13
SHH-203ENST00000435425 RNASE2P10153 161 aaKnown RBP14.23□□□□□ -0.13
SHH-203ENST00000435425 SUB1P53999 127 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHH-203ENST00000435425 WDR12Q9GZL7 423 aaKnown RBP14.23□□□□□ -0.13
SHH-203ENST00000435425 DUXBA0A1W2PPF3 345 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 INS-IGF2F8WCM5 200 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 I3L2K1 104 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 TGOLN2O43493 480 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 OR4E1P0C645 316 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 SPNP16150 400 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 UBE2MP61081 183 aaKnown RBP14.22□□□□□ -0.13
SHH-203ENST00000435425 FAM106AQ4KMX7 169 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 AARDQ4LEZ3 155 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 C4orf46Q504U0 113 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 C11orf87Q6NUJ2 197 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 IL34Q6ZMJ4 242 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 GPHB5Q86YW7 130 aa14.22□□□□□ -0.13
SHH-203ENST00000435425 ZNF256Q9Y2P7 627 aaPredicted RBP14.22□□□□□ -0.13
SHH-203ENST00000435425 TRAV6A0A075B6T7 132 aa14.21□□□□□ -0.13
SHH-203ENST00000435425 PIGBOS1A0A0B4J2F0 54 aa14.21□□□□□ -0.13
SHH-203ENST00000435425 EDN2P20800 178 aa14.21□□□□□ -0.13
SHH-203ENST00000435425 LRTM2Q8N967 370 aa14.21□□□□□ -0.13
SHH-203ENST00000435425 C20orf85Q9H1P6 137 aa14.21□□□□□ -0.13
SHH-203ENST00000435425 A0A1B0GU03 582 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 TCRBP04435 133 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 MFAP4P55083 255 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 DHRS2Q13268 280 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 LYG2Q86SG7 212 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 BSCL2Q96G97 398 aaPredicted RBP14.2□□□□□ -0.14
SHH-203ENST00000435425 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 HIPK2Q9H2X6 1198 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 RBKSQ9H477 322 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 SELENOKQ9Y6D0 94 aa14.2□□□□□ -0.14
SHH-203ENST00000435425 F8W735 103 aaPredicted RBP14.19□□□□□ -0.14
SHH-203ENST00000435425 LGALS9O00182 355 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 IGLV1-51P01701 117 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 HTR2BP41595 481 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 GGNBP1Q5YKI7 109 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 MZT2BQ6NZ67 158 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 OR52B4Q8NGK2 314 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 COQ8AQ8NI60 647 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 CACFD1Q9UGQ2 172 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 TBC1D24Q9ULP9 559 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 TMED3Q9Y3Q3 217 aa14.19□□□□□ -0.14
SHH-203ENST00000435425 FAM240BA0A1B0GVZ2 78 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 C2orf70A6NJV1 201 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 ADAP1O75689 374 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 UPK1BO75841 260 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 OPRK1P41145 380 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 MLANAQ16655 118 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 SPSB3Q6PJ21 355 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 UNQ9165/PRO28630Q6UXU0 137 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 SLC24A4Q8NFF2 622 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 DYNLRB2Q8TF09 96 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 CACNG8Q8WXS5 425 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 HSPB7Q9UBY9 170 aa14.18□□□□□ -0.14
SHH-203ENST00000435425 CORTO00230 105 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 GNG7O60262 68 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 IFNA10P01566 189 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 FOLR2P14207 255 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 GP9P14770 177 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 ADMP35318 185 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 BSXQ3C1V8 233 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 TM4SF20Q53R12 229 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 ADAMTSL5Q6ZMM2 481 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 DUSP18Q8NEJ0 188 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 NUDT15Q9NV35 164 aa14.17□□□□□ -0.14
SHH-203ENST00000435425 GAR1Q9NY12 217 aaKnown RBP14.17□□□□□ -0.14
SHH-203ENST00000435425 IGHV3OR16-8A0A075B7F1 116 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 NUPL2O15504 423 aaKnown RBP14.16□□□□□ -0.14
SHH-203ENST00000435425 PITX3O75364 302 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 CTSGP08311 255 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 H2AFB2P0C5Z0 115 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 NPY1RP25929 384 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 ASAH1Q13510 395 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 C2orf83Q53S99 150 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 PVRIGQ6DKI7 326 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 ATP6V0BQ99437 205 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 TXN2Q99757 166 aa14.16□□□□□ -0.14
SHH-203ENST00000435425 C20orf24Q9BUV8 137 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms