RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
LIMK1-203ENST00000435201 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 PQLC2Q6ZP29 291 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 RNF2Q99496 336 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 MRPL32Q9BYC8 188 aaKnown RBP13.48□□□□□ -0.25
LIMK1-203ENST00000435201 SRD5A3Q9H8P0 318 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 KALRNO60229 2985 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 PPP1R2P9O14990 202 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 FOXH1O75593 365 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 HOXA5P20719 270 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 MLANAQ16655 118 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 C11orf52Q96A22 123 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
LIMK1-203ENST00000435201 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 A0A1W2PPI3 338 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 NDUFA6P56556 154 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 KCNIP4Q6PIL6 250 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 NECAP1Q8NC96 275 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 ACY3Q96HD9 319 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 RITA1Q96K30 269 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 TPSG1Q9NRR2 321 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 INSIG2Q9Y5U4 225 aa13.47□□□□□ -0.25
LIMK1-203ENST00000435201 IGHV3-72A0A0B4J1Y9 119 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 LIPFP07098 398 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 PSG5Q15238 335 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 PRSS8Q16651 343 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 LY6G5BQ8NDX9 201 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 OR2T6Q8NHC8 308 aa13.46□□□□□ -0.25
LIMK1-203ENST00000435201 NEU4Q8WWR8 484 aaPredicted RBP13.46□□□□□ -0.25
LIMK1-203ENST00000435201 CRYGBP07316 175 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 SFTPCP11686 197 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 GATA2P23769 480 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-203ENST00000435201 CDX1P47902 265 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-203ENST00000435201 C11orf71Q6IPW1 123 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 THAP8Q8NA92 274 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 OR5T1Q8NG75 326 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 FRZBQ92765 325 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 IMMP2LQ96T52 175 aa13.46□□□□□ -0.26
LIMK1-203ENST00000435201 PPP5D1E7EU14 171 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 GGCTO75223 188 aaKnown RBP13.45□□□□□ -0.26
LIMK1-203ENST00000435201 TRGC1P0CF51 173 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 COX7A1P24310 79 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 RPL27AP46776 148 aaKnown RBP13.45□□□□□ -0.26
LIMK1-203ENST00000435201 ETFRF1Q6IPR1 90 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 RPEQ96AT9 228 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 BTF3L4Q96K17 158 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
LIMK1-203ENST00000435201 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-203ENST00000435201 MDFIC2A0A1B0GVS7 189 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 TCRBV4S1A1TA0A5B7 111 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 C9JCJ5 164 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 PHOX2AO14813 284 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 C8orf88P0DMB2 117 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 SELENOTP62341 195 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 PVRIGQ6DKI7 326 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 OR1L4Q8NGR5 311 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 PFDN5Q99471 154 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 RNF5Q99942 180 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 FNDC4Q9H6D8 234 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-203ENST00000435201 ONECUT1Q9UBC0 465 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 LY96Q9Y6Y9 160 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 TRBV20OR9-2A0A075B6H5 130 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 A0A1W2PPQ1 181 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 OR7C2O60412 319 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 FAM3BP58499 235 aaPredicted RBP13.44□□□□□ -0.26
LIMK1-203ENST00000435201 TNXAQ16473 311 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 SFRP2Q96HF1 295 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 SLC25A33Q9BSK2 321 aa13.44□□□□□ -0.26
LIMK1-203ENST00000435201 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 TYMSP04818 313 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-203ENST00000435201 DLX1P56177 255 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 BPIFB3P59826 476 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 LCN2P80188 198 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 NPIPB3Q92617 1050 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 ZNF503Q96F45 646 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 DNAJC4Q9NNZ3 241 aa13.43□□□□□ -0.26
LIMK1-203ENST00000435201 PCP4L1A6NKN8 68 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 C22orf46C9J442 243 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 C1QTNF9P0C862 333 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms