RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ZNF747Q9BV97 191 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 PITPNC1Q9UKF7 332 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 TNCP24821 2201 aa8.92□□□□□ -0.98
LINC00539-203ENST00000434601 IGHV7-81A0A0B4J1V7 117 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 UBE2L5PA0A1B0GUS4 154 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 REG1AP05451 166 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 AREGP15514 252 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 SUB1P53999 127 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00539-203ENST00000434601 CX3CL1P78423 397 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 PRR31Q5SQ13 230 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 ALKAL2Q6UX46 152 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 BAP18Q8IXM2 172 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 OR5R1Q8NH85 324 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 PHYHIPLQ96FC7 376 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 ZNF48Q96MX3 618 aaPredicted RBP8.91□□□□□ -0.98
LINC00539-203ENST00000434601 P2RX4Q99571 388 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 ARV1Q9H2C2 271 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 UQCC1Q9NVA1 299 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
LINC00539-203ENST00000434601 TGP01266 2768 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 BTBD17A6NE02 478 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 IFNA5P01569 189 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 IGHV4-59P01825 116 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 APELAP0DMC3 54 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 DLK1P80370 383 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 SLC25A24Q6NUK1 477 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 SCARB1Q8WTV0 552 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 HSPB9Q9BQS6 159 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 FAM103A1Q9BTL3 118 aaKnown RBP8.9□□□□□ -0.98
LINC00539-203ENST00000434601 GGACTQ9BVM4 153 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.98
LINC00539-203ENST00000434601 ESM1Q9NQ30 184 aa8.9□□□□□ -0.98
LINC00539-203ENST00000434601 M0QZK8 103 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 AMY1AP04745 511 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 IER3P46695 156 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 EIF5AL1Q6IS14 154 aaKnown RBP8.89□□□□□ -0.99
LINC00539-203ENST00000434601 Q6YL49 198 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 OR1P1Q8NH06 330 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 SCGB1C1Q8TD33 95 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
LINC00539-203ENST00000434601 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
LINC00539-203ENST00000434601 PRDM13Q9H4Q3 707 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 PARP11Q9NR21 331 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 VPREB3Q9UKI3 123 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 FBXO7Q9Y3I1 522 aa8.89□□□□□ -0.99
LINC00539-203ENST00000434601 F11RQ9Y624 299 aaKnown RBP8.89□□□□□ -0.99
LINC00539-203ENST00000434601 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 SH2D7A6NKC9 451 aaPredicted RBP8.88□□□□□ -0.99
LINC00539-203ENST00000434601 NPIPB5A8MRT5 1133 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 CORTO00230 105 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 CTRB1P17538 263 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 FGF7P21781 194 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 ATP6V0CP27449 155 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 CD69Q07108 199 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 ASPHD1Q5U4P2 390 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 PVRIGQ6DKI7 326 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 CTRB2Q6GPI1 263 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 SIGLECL1Q8N7X8 197 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 TMED6Q8WW62 240 aa8.88□□□□□ -0.99
LINC00539-203ENST00000434601 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 FBXO24O75426 580 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 CRYGCP07315 174 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 SPP1P10451 314 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 EGR2P11161 476 aaPredicted RBP8.87□□□□□ -0.99
LINC00539-203ENST00000434601 OPRK1P41145 380 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 MFAP2P55001 183 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 RUNX1Q01196 453 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 ARSJQ5FYB0 599 aaPredicted RBP8.87□□□□□ -0.99
LINC00539-203ENST00000434601 FAM74A1Q5RGS3 127 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 C19orf35Q6ZS72 473 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 OR1L6Q8NGR2 347 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 TAF15Q92804 592 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC00539-203ENST00000434601 GNPNAT1Q96EK6 184 aaPredicted RBP8.87□□□□□ -0.99
LINC00539-203ENST00000434601 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 SLC25A32Q9H2D1 315 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 WDR83OSQ9Y284 106 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 PLXNB1O43157 2135 aa8.87□□□□□ -0.99
LINC00539-203ENST00000434601 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 RPS10-NUDT3A0A1W2PQS6 291 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 DNAJC9-AS1A6NH13 148 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 CLDN34H7C241 214 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 HOXA3O43365 443 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 TSPAN9O75954 239 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 RNASE1P07998 156 aaKnown RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 DEFA4P12838 97 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 MDKP21741 143 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 GPX4P36969 197 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
LINC00539-203ENST00000434601 AKR1C1Q04828 323 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
LINC00539-203ENST00000434601 C9orf152Q5JTZ5 239 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms