RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 RASSF5Q8WWW0 418 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TOMM6Q96B49 74 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 GINS4Q9BRT9 223 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 ZNF471Q9BX82 626 aaPredicted RBP1.23□□□□□ -2.21
PTPN4-205ENST00000433888 FAM215AQ9Y5M1 114 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 ECM29Q5VYK3 1845 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 MPDZO75970 2070 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 NUP160Q12769 1436 aa1.23□□□□□ -2.21
PTPN4-205ENST00000433888 TRGV4A0A0C4DH28 118 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 IGHV1-18A0A0C4DH31 117 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 A0A0D9SEW6 157 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 C2orf74A8MZ97 194 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 PGRMC1O00264 195 aaKnown RBP1.22□□□□□ -2.21
PTPN4-205ENST00000433888 BANF1O75531 89 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 OR2J2O76002 312 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 SHBGP04278 402 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 IGKV1-16P04430 117 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 TRGC1P0CF51 173 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 LGALS3P17931 250 aaKnown RBP1.22□□□□□ -2.21
PTPN4-205ENST00000433888 CDC42P60953 191 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 AKR1C1Q04828 323 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 TEX36Q5VZQ5 186 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 RPL22L1Q6P5R6 122 aaKnown RBP1.22□□□□□ -2.21
PTPN4-205ENST00000433888 LYG2Q86SG7 212 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 C12orf45Q8N5I9 185 aaPredicted RBP1.22□□□□□ -2.21
PTPN4-205ENST00000433888 OR11H6Q8NGC7 330 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 MRPS24Q96EL2 167 aaKnown RBP1.22□□□□□ -2.21
PTPN4-205ENST00000433888 TIMM21Q9BVV7 248 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 SLC39A9Q9NUM3 307 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 UFC1Q9Y3C8 167 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 MYH3P11055 1940 aa1.22□□□□□ -2.21
PTPN4-205ENST00000433888 NUP155O75694 1391 aa1.21□□□□□ -2.21
PTPN4-205ENST00000433888 MALRD1Q5VYJ5 2156 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 ADGRB3O60242 1522 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 COL4A2P08572 1712 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TRAV3A0A0B4J244 114 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 E5RI56 91 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 SLC22A1O15245 554 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 ORC5O43913 435 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 ATG12O94817 140 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 RBP1P09455 135 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 CD24P25063 80 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 GLRXP35754 106 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TMEM258P61165 79 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 NCALDP61601 193 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 GNG3P63215 75 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TPRXLQ17RH7 258 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TRIQKQ629K1 86 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 Q6Q795 121 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 SLC36A1Q7Z2H8 476 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 Q8NDZ9 215 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 OR10J5Q8NHC4 309 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 GNPDA2Q8TDQ7 276 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 SLC7A6Q92536 515 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 ZC2HC1AQ96GY0 325 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 PRRT1Q99946 306 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TTTY12Q9BZ98 90 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 TRABDQ9H4I3 376 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 NDUFB11Q9NX14 153 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 ERGIC3Q9Y282 383 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 AMMECR1Q9Y4X0 333 aaPredicted RBP1.21□□□□□ -2.22
PTPN4-205ENST00000433888 CAMSAP1Q5T5Y3 1602 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 MIA2Q96PC5 1412 aa1.21□□□□□ -2.22
PTPN4-205ENST00000433888 PXDNLA1KZ92 1463 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 A0A1B0GW54 56 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 ARRDC5A6NEK1 342 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF860A6NHJ4 632 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 HMSDA8MTL9 139 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 H3BRN7 92 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 J3QRE1 110 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 MFSD11O43934 449 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 IFNA1P01562 189 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 UCHL1P09936 223 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 OR4E1P0C645 316 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 UBBP0CG47 229 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 SPI1P17947 270 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 PPIBP23284 216 aaKnown RBP1.2□□□□□ -2.22
PTPN4-205ENST00000433888 CASP1P29466 404 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 PIGPP57054 158 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 HSPE1P61604 102 aaKnown RBP1.2□□□□□ -2.22
PTPN4-205ENST00000433888 B2MP61769 119 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF90Q03938 601 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 IBA57Q5T440 356 aaKnown RBP1.2□□□□□ -2.22
PTPN4-205ENST00000433888 LCA10Q71F78 164 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 TMED4Q7Z7H5 227 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 RPP25LQ8N5L8 163 aaKnown RBP1.2□□□□□ -2.22
PTPN4-205ENST00000433888 WFDC11Q8NEX6 87 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 OR5A1Q8NGJ0 315 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 OR8D4Q8NGM9 314 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 OR13C6PQ8NH95 151 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 TERB2Q8NHR7 220 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 DCANP1Q8TF63 244 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 TMEM106AQ96A25 262 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 ATPIF1Q9UII2 106 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 MYH7BA7E2Y1 1941 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 MYH2Q9UKX2 1941 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 SLIT2O94813 1529 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 ADAMTS7Q9UKP4 1686 aa1.2□□□□□ -2.22
PTPN4-205ENST00000433888 IGKV1D-42A0A075B6H8 117 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms