RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 OR7C2O60412 319 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 CRYBB3P26998 211 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 UNQ6494/PRO21346Q6UXR6 183 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 FAM231DQ6ZW35 169 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 RBMXL3Q8N7X1 1067 aaKnown RBP11.1□□□□□ -0.63
COL6A3-207ENST00000433762 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
COL6A3-207ENST00000433762 SMIM12Q96EX1 92 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
COL6A3-207ENST00000433762 TP53TG3Q9ULZ0 132 aa11.1□□□□□ -0.63
COL6A3-207ENST00000433762 SMIM27A0A1W2PRY6 76 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 GGTLC3B5MD39 225 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 FCN1O00602 326 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 TNFRSF13BO14836 293 aaPredicted RBP11.09□□□□□ -0.63
COL6A3-207ENST00000433762 ACTL6BO94805 426 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 CBLN1P23435 193 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 BPIFB3P59826 476 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 PAX2Q02962 417 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 PVRIGQ6DKI7 326 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 RPRMLQ8N4K4 120 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 DEFB108BQ8NET1 73 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 FAM167A-AS1Q96KT0 104 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 DNAJC4Q9NNZ3 241 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 CADP27708 2225 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 C16orf97H3BN30 126 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 SLC17A3O00476 420 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 SCGB1D1O95968 90 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 MYOD1P15172 320 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 NDUFB7P17568 137 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 FAM27E3Q08E93 113 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
COL6A3-207ENST00000433762 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 CHRDL1Q9BU40 450 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
COL6A3-207ENST00000433762 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
COL6A3-207ENST00000433762 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 IGLV2-8P01709 118 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 REG1AP05451 166 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 MC5RP33032 325 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 STXBP6Q8NFX7 210 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
COL6A3-207ENST00000433762 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 YLPM1P49750 1951 aaKnown RBP11.08□□□□□ -0.64
COL6A3-207ENST00000433762 PPIAL4EA0A075B759 164 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 PPIAL4DF5H284 164 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 TMEM178BH3BS89 294 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 PPIAL4FP0DN26 164 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 LINC00310P59036 64 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 ADIPOQQ15848 244 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 ALKBH2Q6NS38 261 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 OR9G1Q8NH87 305 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 ST6GALNAC6Q969X2 333 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
COL6A3-207ENST00000433762 TNCP24821 2201 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 NUPR1O60356 82 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 AMY1AP04745 511 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 HNF1AP20823 631 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 IER3P46695 156 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 LGALS7P47929 136 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 TNFRSF14Q92956 283 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 JKAMPQ9P055 326 aa11.07□□□□□ -0.64
COL6A3-207ENST00000433762 A0A1B0GV90 55 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 SERF1AO75920 110 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
COL6A3-207ENST00000433762 TMEM200BQ69YZ2 307 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 IZUMO1RA6ND01 250 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 M0QZK8 103 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 NDUFB3O43676 98 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 BRS3P32247 399 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
COL6A3-207ENST00000433762 UBE2L3P68036 154 aaKnown RBP11.06□□□□□ -0.64
COL6A3-207ENST00000433762 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 MOB3BQ86TA1 216 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
COL6A3-207ENST00000433762 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 OR5I1Q13606 314 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 Q6ZWC4 215 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 BAGE3Q86Y29 109 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 ST6GALNAC3Q8NDV1 305 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 SAP30LQ9HAJ7 183 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 PLCE1Q9P212 2302 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 PRRG2O14669 202 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 COX7A2P2O60397 106 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 CRYGCP07315 174 aa11.05□□□□□ -0.64
COL6A3-207ENST00000433762 DLX6P56179 175 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms