RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 FAM223BA6NKX1 122 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 IFNA4P05014 189 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 BCAP31P51572 246 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 EXOSC2Q13868 293 aaKnown RBP11.92□□□□□ -0.5
CNOT9-205ENST00000433439 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 SHISA2Q6UWI4 295 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 FAM223AQ8IWN6 122 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 U3KQ87 197 aa11.92□□□□□ -0.5
CNOT9-205ENST00000433439 ANKRD34BA5PLL1 514 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 MFSD2BA6NFX1 497 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 PVALBP20472 110 aaPredicted RBP11.91□□□□□ -0.5
CNOT9-205ENST00000433439 OPRK1P41145 380 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 RPP30P78346 268 aaKnown RBP11.91□□□□□ -0.5
CNOT9-205ENST00000433439 IL15RAQ13261 267 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
CNOT9-205ENST00000433439 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 C8orf86Q6ZUL3 223 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
CNOT9-205ENST00000433439 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
CNOT9-205ENST00000433439 STRAPQ9Y3F4 350 aaKnown RBP11.91□□□□□ -0.5
CNOT9-205ENST00000433439 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 BRI3O95415 125 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 TMEM50AO95807 157 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 MT-CO2P00403 227 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 RLN2P04090 185 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
CNOT9-205ENST00000433439 RAB11AP62491 216 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 NOXA1Q86UR1 476 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 UBAC2Q8NBM4 344 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 SMIM8Q96KF7 97 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 DUX3Q96PT4 197 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 OR4C12Q96R67 309 aa11.9□□□□□ -0.5
CNOT9-205ENST00000433439 ADARB2-AS1A8MUL3 147 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 CORTO00230 105 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 CAV2P51636 162 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 PAX9P55771 341 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 MLANAQ16655 118 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 ZC4H2Q9NQZ6 224 aa11.89□□□□□ -0.51
CNOT9-205ENST00000433439 A0A1B0GVG6 124 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 K7EIM0 57 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 MPC2O95563 127 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 LY86O95711 162 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
CNOT9-205ENST00000433439 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 Q56UQ5 140 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 OR8G2PQ6IF36 304 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 ETV3LQ6ZN32 361 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 COL6A5A8TX70 2615 aa11.88□□□□□ -0.51
CNOT9-205ENST00000433439 H0YIZ8 118 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 I3L2K1 104 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 DEDDO75618 318 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 CCNKO75909 580 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 TRBV12-3P01733 135 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 GIPP09681 153 aaPredicted RBP11.87□□□□□ -0.51
CNOT9-205ENST00000433439 TAS2R30P59541 319 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 KLK9Q2XQG4 91 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
CNOT9-205ENST00000433439 VN1R17PQ8TDU5 208 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 DPF1Q92782 380 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
CNOT9-205ENST00000433439 KLK9Q9UKQ9 250 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
CNOT9-205ENST00000433439 IGHV4OR15-8A0A075B7B6 117 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 A0A087WW49 117 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 RPS10-NUDT3A0A1W2PQS6 291 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 TSC22D2O75157 780 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 PF4P02776 101 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 PET100P0DJ07 73 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 GPR183P32249 361 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 MFAP4P55083 255 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
CNOT9-205ENST00000433439 RAP2BP61225 183 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 OR11H1Q8NG94 326 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 ZNF502Q8TBZ5 544 aa11.86□□□□□ -0.51
CNOT9-205ENST00000433439 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms