RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 PINX1Q96BK5 328 aaKnown RBP4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 GPR61Q9BZJ8 451 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 PLEKHA3Q9HB20 300 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 SLC2A8Q9NY64 477 aa4.41□□□□□ -1.7
HMGB3P24-201ENST00000433260 IGHV3OR16-8A0A075B7F1 116 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 TRBV7-1A0A0A6YYK4 115 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR2T8A6NH00 312 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CENPXA8MT69 81 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 PRSS47A8MTI9 375 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CYB5BO43169 146 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 GGCTO75223 188 aaKnown RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 B3GALNT1O75752 331 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CSN3P07498 182 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 FGF2P09038 288 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 ANXA3P12429 323 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 IL7P13232 177 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 GPR183P32249 361 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 SUPT4H1P63272 117 aaKnown RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 Q56UQ5 140 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 PLET1Q6UQ28 207 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CADM3Q8N126 398 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR2C3Q8N628 320 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR9G4Q8NGQ1 327 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 RBPMSQ93062 196 aaKnown RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CXorf58Q96LI9 332 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 SLC25A21Q9BQT8 299 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 ENY2Q9NPA8 101 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 HEYLQ9NQ87 328 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 CACNG5Q9UF02 275 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF256Q9Y2P7 627 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM56-RWDD3S4R434 201 aa4.4□□□□□ -1.71
HMGB3P24-201ENST00000433260 IZUMO1RA6ND01 250 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 NAP1L6A6NFF2 107 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 CEBPZOSA8MTT3 80 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 PLA2G10O15496 165 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 SFT2D2O95562 160 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 MT-CO2P00403 227 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 HOXB5P09067 269 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 P0C879 139 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 INSL3P51460 131 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 SUB1P53999 127 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 PPP1R1AQ13522 171 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 ANKRD55Q3KP44 614 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 FAM106AQ4KMX7 169 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 TMEM128Q5BJH2 165 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 THOC7Q6I9Y2 204 aaKnown RBP4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 C11orf87Q6NUJ2 197 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 TEPPQ6URK8 271 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 IL34Q6ZMJ4 242 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 GPHB5Q86YW7 130 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 LGI3Q8N145 548 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 CENPSQ8N2Z9 138 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 OR1S1Q8NH92 325 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZNF502Q8TBZ5 544 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 VN1R17PQ8TDU5 208 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 CACNG8Q8WXS5 425 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 GALNT14Q96FL9 552 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 CHRDL1Q9BU40 450 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 ZMAT5Q9UDW3 170 aaKnown RBP4.39□□□□□ -1.71
HMGB3P24-201ENST00000433260 TRAV6A0A075B6T7 132 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 A0A0B4J2A0 478 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 I3L2K1 104 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 J3KRW8 73 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 K7EIM0 57 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 LYRM1O43325 122 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 TGOLN2O43493 480 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 GNG7O60262 68 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 ADAP1O75689 374 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 YIF1AO95070 293 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 NDUFB6O95139 128 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 CTSGP08311 255 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 SULT1A3P0DMM9 295 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 SULT1A4P0DMN0 295 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 RNASE2P10153 161 aaKnown RBP4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 FOLR2P14207 255 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 GP9P14770 177 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 ANXA7P20073 488 aaKnown RBP4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 CBLN1P23435 193 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 BTCP35070 178 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 MFAP4P55083 255 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 SPCS3P61009 180 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 RBMS2Q15434 407 aaKnown RBP4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 GUCA2BQ16661 112 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 KLK9Q2XQG4 91 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 FAM209BQ5JX69 171 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 UNQ9165/PRO28630Q6UXU0 137 aa4.38□□□□□ -1.71
HMGB3P24-201ENST00000433260 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms