RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
RBM39-213ENST00000433027 DEFA4P12838 97 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 TPT1P13693 172 aaKnown RBP12.13□□□□□ -0.47
RBM39-213ENST00000433027 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 SLA2Q9H6Q3 261 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 UQCC1Q9NVA1 299 aa12.13□□□□□ -0.47
RBM39-213ENST00000433027 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 CRLF1O75462 422 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 AREGP15514 252 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 CD69Q07108 199 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 FAM209BQ5JX69 171 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 SMR3AQ99954 134 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 PAIP2BQ9ULR5 123 aaKnown RBP12.12□□□□□ -0.47
RBM39-213ENST00000433027 HIVEP1P15822 2718 aa12.12□□□□□ -0.47
RBM39-213ENST00000433027 MXRA5Q9NR99 2828 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 ASPHD1Q5U4P2 390 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 HAPLN4Q86UW8 402 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
RBM39-213ENST00000433027 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
RBM39-213ENST00000433027 CYTL1Q9NRR1 136 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 KCNIP2Q9NS61 270 aa12.11□□□□□ -0.47
RBM39-213ENST00000433027 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
RBM39-213ENST00000433027 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 IGLV11-55A0A075B6I3 123 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 SCGB2A1O75556 95 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 FCGR2BP31994 310 aaPredicted RBP12.1□□□□□ -0.47
RBM39-213ENST00000433027 BLCAPP62952 87 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 RAB31Q13636 194 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 VN1R17PQ8TDU5 208 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 SLC35E1Q96K37 410 aa12.1□□□□□ -0.47
RBM39-213ENST00000433027 MTORP42345 2549 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 IFNA7P01567 189 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
RBM39-213ENST00000433027 OPRK1P41145 380 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 SLC35B1P78383 322 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 ARL16Q0P5N6 197 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 CLINT1Q14677 625 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 TMEM116Q8NCL8 245 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 TXN2Q99757 166 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 GINS3Q9BRX5 216 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
RBM39-213ENST00000433027 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
RBM39-213ENST00000433027 FBXO7Q9Y3I1 522 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 TIMM9Q9Y5J7 89 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 F8P00451 2351 aa12.09□□□□□ -0.47
RBM39-213ENST00000433027 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
RBM39-213ENST00000433027 INAFM1C9JVW0 142 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 C17orf112F2Z3M2 114 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 CRYBA1P05813 215 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 PPIFP30405 207 aaKnown RBP12.08□□□□□ -0.48
RBM39-213ENST00000433027 SERF2P84101 59 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 ZNF767PQ75MW2 155 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 CENPVQ7Z7K6 275 aaPredicted RBP12.08□□□□□ -0.48
RBM39-213ENST00000433027 USMG5Q96IX5 58 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 WDR61Q9GZS3 305 aaKnown RBP12.08□□□□□ -0.48
RBM39-213ENST00000433027 ZNF702PQ9H963 129 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
RBM39-213ENST00000433027 NSD1Q96L73 2696 aaPredicted RBP12.07□□□□□ -0.48
RBM39-213ENST00000433027 TRAV30A0A087WSZ9 112 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 I3L2K1 104 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 TCF21O43680 179 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 RAB5CP51148 216 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 CFHR3Q02985 330 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 RPL7L1Q6DKI1 246 aaKnown RBP12.07□□□□□ -0.48
RBM39-213ENST00000433027 TEX261Q6UWH6 196 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 OR4X1Q8NH49 305 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 LRRC20Q8TCA0 184 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 TAF15Q92804 592 aaKnown RBP eCLIP12.07□□□□□ -0.48
RBM39-213ENST00000433027 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 SMIM3Q9BZL3 60 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 C16orf95Q9H693 158 aa12.07□□□□□ -0.48
RBM39-213ENST00000433027 WFDC1Q9HC57 220 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms