RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 SSX8Q7RTT4 187 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 TPPP3Q9BW30 176 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 LAMP3Q9UQV4 416 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 POLR3KQ9Y2Y1 108 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-212ENST00000432645 IGHV1-69-2A0A0G2JMI3 117 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR11H12B2RN74 326 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 SCGB1D1O95968 90 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR5G3P0C626 314 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 MDKP21741 143 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-212ENST00000432645 PRB3Q04118 309 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-212ENST00000432645 TMEM200BQ69YZ2 307 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 MUC15Q8N387 334 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 TCTEX1D1Q8N7M0 179 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR11H1Q8NG94 326 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR4P4Q8NGL7 312 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 OR4A16Q8NH70 328 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 CTSZQ9UBR2 303 aa6.82□□□□□ -1.32
HDAC9-212ENST00000432645 HRNRQ86YZ3 2850 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-212ENST00000432645 LY6HO94772 140 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 REG1BP48304 166 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 CKS1BP61024 79 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 ERVK-16P61578 105 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 CCDC144NLQ6NUI1 221 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 TMEM14EPQ6UXP3 125 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 ZNF439Q8NDP4 499 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 SFRP2Q96HF1 295 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 RPUSD1Q9UJJ7 312 aaKnown RBP6.81□□□□□ -1.32
HDAC9-212ENST00000432645 LINC00312Q9Y6C7 94 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 NDUFB3O43676 98 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 OR2C1O95371 312 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 IGKV1-16P04430 117 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 CXCL1P09341 107 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 MYOD1P15172 320 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 DLX1P56177 255 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 COX19Q49B96 90 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 MTURNQ8N3F0 131 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 DDB2Q92466 427 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 RAB9BQ9NP90 201 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 RPRMQ9NS64 109 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 ARFGEF3Q5TH69 2177 aa6.81□□□□□ -1.32
HDAC9-212ENST00000432645 SPTBN1Q01082 2364 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 WIPF1O43516 503 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 COL8A2P25067 703 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 ATP5IP56385 69 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 PAX2Q02962 417 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 LRRC10Q5BKY1 277 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 TCTEX1D4Q5JR98 221 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 SPSB3Q6PJ21 355 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 DSCAML1Q8TD84 2053 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 LRRC75BQ2VPJ9 315 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 LCN15Q6UWW0 184 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 ZNF562Q6V9R5 426 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 STPG4Q8N801 248 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 OR10P1Q8NGE3 313 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 WDR61Q9GZS3 305 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 HEYLQ9NQ87 328 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 HMGB3O15347 200 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 TRGC1P0CF51 173 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 CT45A6P0DMU7 189 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 CT45A5P0DMU8 189 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 CT45A7P0DMV0 189 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 RELBQ01201 579 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 DIAPH2-AS1Q14236 149 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 SLC25A48Q6ZT89 311 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 ABHD12Q8N2K0 398 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 TAF15Q92804 592 aaKnown RBP eCLIP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 DAZAP1Q96EP5 407 aaKnown RBP6.8□□□□□ -1.32
HDAC9-212ENST00000432645 SLC35B3Q9H1N7 401 aa6.8□□□□□ -1.32
HDAC9-212ENST00000432645 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 TANC2Q9HCD6 1990 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 PMS2P5A8MQ11 134 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 G3V4G9 280 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 TFF3Q07654 80 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 FBXL19-AS1Q494R0 122 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 C4orf17Q53FE4 359 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
HDAC9-212ENST00000432645 RAB39BQ96DA2 213 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 HARBI1Q96MB7 349 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 CIB3Q96Q77 187 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-212ENST00000432645 PBDC1Q9BVG4 233 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-212ENST00000432645 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 PKD1L2Q7Z442 2459 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 HCFC1P51610 2035 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 PPP5D1E7EU14 171 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 RBFOX2O43251 390 aaKnown RBP eCLIP6.79□□□□□ -1.32
HDAC9-212ENST00000432645 OR7C2O60412 319 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 MT-CO2P00403 227 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 DEFA4P12838 97 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 THBS3P49746 956 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 EFNB3Q15768 340 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 ZNF672Q499Z4 452 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-212ENST00000432645 CYB561D1Q8N8Q1 229 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 ABHD5Q8WTS1 349 aa6.79□□□□□ -1.32
HDAC9-212ENST00000432645 Q8WTZ3 238 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms