RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 SNAPC5O75971 98 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 DFFBO76075 338 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
SEC13-212ENST00000432213 IGKV1-5P01602 117 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
SEC13-212ENST00000432213 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 C4BPBP20851 252 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 DEFB131AP59861 70 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 PRCDQ00LT1 54 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
SEC13-212ENST00000432213 CADM3Q8N126 398 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 ZNF114Q8NC26 417 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 YIPF6Q96EC8 236 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 MS4A6AQ9H2W1 248 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
SEC13-212ENST00000432213 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
SEC13-212ENST00000432213 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 P0C879 139 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 PI3P19957 117 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 MFAP4P55083 255 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 Q8NAQ8 132 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 GPX8Q8TED1 209 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
SEC13-212ENST00000432213 M0QYG6 137 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 CYB5BO43169 146 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 PPP5CP53041 499 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 TAS2R46P59540 309 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 RELQ04864 619 aaPredicted RBP10.32□□□□□ -0.76
SEC13-212ENST00000432213 RBMS2Q15434 407 aaKnown RBP10.32□□□□□ -0.76
SEC13-212ENST00000432213 MLANAQ16655 118 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 S100A16Q96FQ6 103 aaKnown RBP10.32□□□□□ -0.76
SEC13-212ENST00000432213 SCRT1Q9BWW7 348 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 YTHDF1Q9BYJ9 559 aaKnown RBP10.32□□□□□ -0.76
SEC13-212ENST00000432213 FNDC4Q9H6D8 234 aaPredicted RBP10.32□□□□□ -0.76
SEC13-212ENST00000432213 PUS1Q9Y606 427 aaKnown RBP eCLIP10.32□□□□□ -0.76
SEC13-212ENST00000432213 FAT2Q9NYQ8 4349 aa10.32□□□□□ -0.76
SEC13-212ENST00000432213 A0A0G2JRQ6 117 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 GNG7O60262 68 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 PRSS3P35030 304 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 RNASE12Q5GAN4 147 aaKnown RBP10.31□□□□□ -0.76
SEC13-212ENST00000432213 CMTM1Q8IZ96 169 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 TMEM217Q8N7C4 229 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 OR6F1Q8NGZ6 308 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
SEC13-212ENST00000432213 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
SEC13-212ENST00000432213 A0A0B4J293 547 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 RNASE2P10153 161 aaKnown RBP10.3□□□□□ -0.76
SEC13-212ENST00000432213 HSPE1P61604 102 aaKnown RBP10.3□□□□□ -0.76
SEC13-212ENST00000432213 NCS1P62166 190 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 KCTD21Q4G0X4 260 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 PVRIGQ6DKI7 326 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 H2BFWTQ7Z2G1 175 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 SNX29P2Q8IUI4 249 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 BORCS5Q969J3 196 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 TXN2Q99757 166 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 X6R8D5 127 aa10.3□□□□□ -0.76
SEC13-212ENST00000432213 TMEM50AO95807 157 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 ZNF767PQ75MW2 155 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 TRPT1Q86TN4 253 aaKnown RBP10.29□□□□□ -0.76
SEC13-212ENST00000432213 TSC22D3Q99576 134 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 CLEC5AQ9NY25 188 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 DNAH2Q9P225 4427 aa10.29□□□□□ -0.76
SEC13-212ENST00000432213 IGLL5B9A064 214 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 K7EQG2 157 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 ELK1P19419 428 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 TSPAN5P62079 268 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 TMEM187Q14656 261 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 GSG1LQ6UXU4 331 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 ZNF600Q6ZNG1 722 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 Q6ZRM9 215 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 Q6ZTC4 211 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 OR4D10Q8NGI6 311 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 C2CD4CQ8TF44 421 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 C6orf62Q9GZU0 229 aaPredicted RBP10.28□□□□□ -0.76
SEC13-212ENST00000432213 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
SEC13-212ENST00000432213 COMMD3Q9UBI1 195 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
SEC13-212ENST00000432213 HPGDSO60760 199 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 IGKV1-17P01599 117 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 ZNF688P0C7X2 276 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 ETV6P41212 452 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 UCP3P55916 312 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 SP6Q3SY56 376 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 DCANP1Q8TF63 244 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 Q9H521 79 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 RABAC1Q9UI14 185 aa10.27□□□□□ -0.77
SEC13-212ENST00000432213 DNASE2O00115 360 aaPredicted RBP10.26□□□□□ -0.77
SEC13-212ENST00000432213 HLA-DMBP28068 263 aa10.26□□□□□ -0.77
SEC13-212ENST00000432213 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms