RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PAX2Q02962 417 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 PRSS8Q16651 343 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 ZNF506Q5JVG8 444 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 TEPPQ6URK8 271 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 RAB24Q969Q5 203 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 SSX3Q99909 188 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 MPDU1O75352 247 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 CRYGBP07316 175 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 C19orf35Q6ZS72 473 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 CBLN2Q8IUK8 224 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 TEX45Q8NA69 505 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 NRGNQ92686 78 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 C20orf24Q9BUV8 137 aa13.37□□□□□ -0.27
USHBP1-203ENST00000431146 CTXND1A0A1B0GTU2 59 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 LOC102723971A0A1B0GUV8 181 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 A0A1W2PN81 502 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 VENTXO95231 258 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 SRP19P09132 144 aaKnown RBP13.36□□□□□ -0.27
USHBP1-203ENST00000431146 CHRNA7P36544 502 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 OPRK1P41145 380 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 SRSF1Q07955 248 aaKnown RBP eCLIP13.36□□□□□ -0.27
USHBP1-203ENST00000431146 ACOT6Q3I5F7 207 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-203ENST00000431146 DYNAPQ8N1N2 210 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 CYB561D1Q8N8Q1 229 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 ACTR3CQ9C0K3 210 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-203ENST00000431146 IGKV1OR2-108A0A075B7D4 117 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 IGHV2-70DA0A0C4DH43 119 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 FCN1O00602 326 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 ACTL6BO94805 426 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 AKR1C3P42330 323 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 PDLIM4P50479 330 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 GAMTQ14353 236 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 GPR61Q9BZJ8 451 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 SIRPDQ9H106 197 aa13.36□□□□□ -0.27
USHBP1-203ENST00000431146 A1L4Q6 167 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 BCL2P10415 239 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 CEACAM3P40198 252 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-203ENST00000431146 PLGLAQ15195 96 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 C1orf122Q6ZSJ8 110 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 PPP1R27Q86WC6 154 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 KIR3DL3Q8N743 410 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 OR2T6Q8NHC8 308 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 CFHR4Q92496 578 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 P2RX4Q99571 388 aa13.35□□□□□ -0.27
USHBP1-203ENST00000431146 CYB5BO43169 146 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 TOX4O94842 621 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 AREGP15514 252 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 RPL27AP46776 148 aaKnown RBP13.34□□□□□ -0.27
USHBP1-203ENST00000431146 MMDQ15546 238 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 SOHLH1Q5JUK2 328 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 C2orf88Q9BSF0 95 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 FBN2P35556 2912 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 IGLC7A0M8Q6 106 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 HSPB1P04792 205 aaKnown RBP13.34□□□□□ -0.27
USHBP1-203ENST00000431146 GATA2P23769 480 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-203ENST00000431146 CD69Q07108 199 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 HES1Q14469 280 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
USHBP1-203ENST00000431146 ABCA1O95477 2261 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 C5orf52A6NGY3 159 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 INS-IGF2F8WCM5 200 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 M0R036 132 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 FOLR2P14207 255 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 SSBP2P81877 361 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 FAM168AQ92567 244 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 ACY3Q96HD9 319 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 C14orf144Q96I85 54 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 SMDT1Q9H4I9 107 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 FNDC4Q9H6D8 234 aaPredicted RBP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 PUS1Q9Y606 427 aaKnown RBP eCLIP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 A0A1W2PPV4 95 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 ATP5J2P56134 94 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 LGALS4P56470 323 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 AWAT1Q58HT5 328 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 RBMS3Q6XE24 437 aaKnown RBP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 REC114Q7Z4M0 266 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 TBX15Q96SF7 602 aa13.33□□□□□ -0.28
USHBP1-203ENST00000431146 UNKLQ9H9P5 680 aaKnown RBP13.33□□□□□ -0.28
USHBP1-203ENST00000431146 SNRNP70P08621 437 aaKnown RBP13.32□□□□□ -0.28
USHBP1-203ENST00000431146 TMEM144Q7Z5S9 345 aa13.32□□□□□ -0.28
USHBP1-203ENST00000431146 PERPQ96FX8 193 aa13.32□□□□□ -0.28
USHBP1-203ENST00000431146 POLQO75417 2590 aa13.32□□□□□ -0.28
USHBP1-203ENST00000431146 IGHV4-61A0A0C4DH41 118 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 SEC14L6B5MCN3 397 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 TCAPO15273 167 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 GOSR1O95249 250 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 OR10J1P30954 320 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 MFAP2P55001 183 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
USHBP1-203ENST00000431146 RAB5BP61020 215 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 RAB31Q13636 194 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 RUSC1-AS1Q66K80 236 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms