RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 STRAPQ9Y3F4 350 aaKnown RBP8.58□□□□□ -1.04
CHD4-202ENST00000430771 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 NUDT19A8MXV4 375 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 E5RGE8 158 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 H3BP45 60 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 MPC2O95563 127 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 IFNA4P05014 189 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 OPRK1P41145 380 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 BCAP31P51572 246 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 CD83Q01151 205 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 ATP5G2Q06055 141 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 SPANXN5Q5MJ07 72 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
CHD4-202ENST00000430771 EEF1AKMT3Q96AZ1 226 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 UBE2E2Q96LR5 201 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 FANCD2OSQ96PS1 177 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 CITED1Q99966 193 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 CITED2Q99967 270 aaPredicted RBP8.57□□□□□ -1.04
CHD4-202ENST00000430771 KLK15Q9H2R5 256 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 FBXL7Q9UJT9 491 aa8.57□□□□□ -1.04
CHD4-202ENST00000430771 C15orf62A8K5M9 175 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 SCGB2A1O75556 95 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
CHD4-202ENST00000430771 CDX1P47902 265 aaPredicted RBP8.56□□□□□ -1.04
CHD4-202ENST00000430771 CAV2P51636 162 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 MFAP2P55001 183 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 DEFA5Q01523 94 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 PVRIGQ6DKI7 326 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 ETFRF1Q6IPR1 90 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 C11orf87Q6NUJ2 197 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 PRSS54Q6PEW0 395 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 STX12Q86Y82 276 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 ZNF491Q8N8L2 437 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 THAP6Q8TBB0 222 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 VN1R17PQ8TDU5 208 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 C4orf3Q8WVX3 66 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
CHD4-202ENST00000430771 OR4C12Q96R67 309 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 LYRM2Q9NU23 88 aaPredicted RBP8.56□□□□□ -1.04
CHD4-202ENST00000430771 DMRT1Q9Y5R6 373 aa8.56□□□□□ -1.04
CHD4-202ENST00000430771 TRBV7-1A0A0A6YYK4 115 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 MT-CO2P00403 227 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 SLC25A4P12235 298 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 P2RY1P47900 373 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 KRTAP10-3P60369 221 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 TMEM14EPQ6UXP3 125 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 ETV3LQ6ZN32 361 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 OR2T35Q8NGX2 323 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 SLC35E1Q96K37 410 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 ATP6V0BQ99437 205 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 SLC25A31Q9H0C2 315 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 C11orf1Q9H5F2 150 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 GAR1Q9NY12 217 aaKnown RBP8.55□□□□□ -1.04
CHD4-202ENST00000430771 C21orf62Q9NYP8 219 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 MBD2Q9UBB5 411 aa8.55□□□□□ -1.04
CHD4-202ENST00000430771 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 MFSD2BA6NFX1 497 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 I3L2K1 104 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 K7EIM0 57 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 NDUFB8O95169 186 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 TMEM50AO95807 157 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 IGHV3-11P01762 117 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 PAX9P55771 341 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 CD69Q07108 199 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 SLC16A13Q7RTY0 426 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 TMEM170AQ8WVE7 144 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 DCUN1D4Q92564 292 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 GNB4Q9HAV0 340 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 OR5AC2Q9NZP5 309 aa8.54□□□□□ -1.04
CHD4-202ENST00000430771 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.53□□□□□ -1.04
CHD4-202ENST00000430771 METTL15P1P0C7V9 234 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 LYL1P12980 280 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
CHD4-202ENST00000430771 NUP62P37198 522 aaPredicted RBP8.53□□□□□ -1.04
CHD4-202ENST00000430771 NPBWR1P48145 328 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 SULT1A1P50225 295 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 MFAP4P55083 255 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 HBG1P69891 147 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 HBG2P69892 147 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 RUNX1Q01196 453 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 BAXQ07812 192 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 Q56UQ5 140 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 OR8G2PQ6IF36 304 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 ZNF343Q6P1L6 599 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 ACSM6Q6P461 480 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 C8orf86Q6ZUL3 223 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 AKAP14Q86UN6 197 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 OR4F17Q8NGA8 305 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 OR10P1Q8NGE3 313 aa8.53□□□□□ -1.04
CHD4-202ENST00000430771 ZNF502Q8TBZ5 544 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms