RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 A0A1B0GU03 582 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 C15orf62A8K5M9 175 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 NUPL2O15504 423 aaKnown RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 ST8SIA3O43173 380 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 CD74P04233 296 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 RNASE2P10153 161 aaKnown RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 PGAM2P15259 253 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 RPL35AP18077 110 aaKnown RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 ALDH3B2P48448 385 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 RORCP51449 518 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 HSPE1P61604 102 aaKnown RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 PMS2P11Q13670 270 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 FAM90A2PQ658T7 463 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 PVRIGQ6DKI7 326 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 Q6ZRM9 215 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 MARCH1Q8TCQ1 289 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 TMEM56Q96MV1 263 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 TSC22D3Q99576 134 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
HDAC4-202ENST00000430200 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
HDAC4-202ENST00000430200 IGHV3-66A0A0C4DH42 116 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 K7EMT4 169 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 CTDSP2O14595 271 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 ZNF182P17025 639 aaPredicted RBP8.68□□□□□ -1.02
HDAC4-202ENST00000430200 TFPI2P48307 235 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 LYG2Q86SG7 212 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 ARRDC1Q8N5I2 433 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 OR4A16Q8NH70 328 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 ST8SIA2Q92186 375 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 MAP6D1Q9H9H5 199 aa8.68□□□□□ -1.02
HDAC4-202ENST00000430200 C3orf85A0A1B0GTC6 90 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 CYB5BO43169 146 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 UCP1P25874 307 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 AKR1C2P52895 323 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 MFAP4P55083 255 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 MLANAQ16655 118 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 BSXQ3C1V8 233 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 ANKRD55Q3KP44 614 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 LPCAT3Q6P1A2 487 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 WFDC3Q8IUB2 231 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 GBGT1Q8N5D6 347 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 TMEM116Q8NCL8 245 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 TMEM170AQ8WVE7 144 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 FKBP11Q9NYL4 201 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 PRR13Q9NZ81 148 aa8.67□□□□□ -1.02
HDAC4-202ENST00000430200 HECTD4Q9Y4D8 3996 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 OR4C46A6NHA9 309 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 INS-IGF2F8WCM5 200 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 YIF1AO95070 293 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 OR5AC1P0C628 307 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 ETV6P41212 452 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 TNFRSF9Q07011 255 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 SCGB2B2Q4G0G5 96 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 Q6ZWC4 215 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 SLC35G3Q8N808 338 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 OR4C16Q8NGL9 310 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 RNF183Q96D59 192 aa8.66□□□□□ -1.02
HDAC4-202ENST00000430200 ZNF486Q96H40 463 aaPredicted RBP8.66□□□□□ -1.02
HDAC4-202ENST00000430200 RTBDNQ9BSG5 229 aaPredicted RBP8.66□□□□□ -1.02
HDAC4-202ENST00000430200 PUS1Q9Y606 427 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC4-202ENST00000430200 SPRY2O43597 315 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 GNG7O60262 68 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 RAB3DO95716 219 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 TBPP20226 339 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 RELQ04864 619 aaPredicted RBP8.65□□□□□ -1.02
HDAC4-202ENST00000430200 AARDQ4LEZ3 155 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 STEAP1BQ6NZ63 245 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 TERB2Q8NHR7 220 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 SMIM4Q8WVI0 70 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 AP3S1Q92572 193 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 TMEM230Q96A57 120 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 TXN2Q99757 166 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 VSIRQ9H7M9 311 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.02
HDAC4-202ENST00000430200 KIR2DL5BA0A0G2JN68 375 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 KIR2DL5BA0A0G2JPC4 375 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 GABARAPH6UMI1 98 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 DFFBO76075 338 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 JTBO76095 146 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 NXPH3O95157 252 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 IGKV1-17P01599 117 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 S100GP29377 79 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 HOXA1P49639 335 aaPredicted RBP8.64□□□□□ -1.03
HDAC4-202ENST00000430200 APOC4P55056 127 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 TAS2R19P59542 299 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 MEF2DQ14814 521 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 TRIM16LQ309B1 348 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 KIR2DL5AQ8N109 375 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 KIR2DL5BQ8NHK3 375 aa8.64□□□□□ -1.03
HDAC4-202ENST00000430200 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms