RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 KLK9Q9UKQ9 250 aa12.96□□□□□ -0.33
UBE3D-204ENST00000430071 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 CCSO14618 274 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 PRAF2O60831 178 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 OR2J3O76001 311 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 OR1S1Q8NH92 325 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 HSPB7Q9UBY9 170 aa12.95□□□□□ -0.34
UBE3D-204ENST00000430071 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
UBE3D-204ENST00000430071 F11RQ9Y624 299 aaKnown RBP12.95□□□□□ -0.34
UBE3D-204ENST00000430071 INS-IGF2F8WCM5 200 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 NDUFB8O95169 186 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 DHFRP00374 187 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 IFNA21P01568 189 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 DEFA4P12838 97 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 HOXA1P49639 335 aaPredicted RBP12.94□□□□□ -0.34
UBE3D-204ENST00000430071 INSL3P51460 131 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
UBE3D-204ENST00000430071 C13orf42A0A1B0GVH6 325 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 RGS21Q2M5E4 152 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 NECAP1Q8NC96 275 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 RBKSQ9H477 322 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
UBE3D-204ENST00000430071 KMT2CQ8NEZ4 4911 aaKnown RBP12.93□□□□□ -0.34
UBE3D-204ENST00000430071 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
UBE3D-204ENST00000430071 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
UBE3D-204ENST00000430071 ERHP84090 104 aaKnown RBP12.93□□□□□ -0.34
UBE3D-204ENST00000430071 IAH1Q2TAA2 248 aaPredicted RBP12.93□□□□□ -0.34
UBE3D-204ENST00000430071 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
UBE3D-204ENST00000430071 ZNF114Q8NC26 417 aa12.93□□□□□ -0.34
UBE3D-204ENST00000430071 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
UBE3D-204ENST00000430071 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 RNASE2P10153 161 aaKnown RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 C15orf32Q32M92 178 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 SLC25A24Q6NUK1 477 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 IL34Q6ZMJ4 242 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 ZBTB8BQ8NAP8 495 aaPredicted RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 OR4D5Q8NGN0 318 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 RANGRFQ9HD47 186 aaPredicted RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 HEYLQ9NQ87 328 aaPredicted RBP12.92□□□□□ -0.34
UBE3D-204ENST00000430071 CACFD1Q9UGQ2 172 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 S4R3C0 116 aa12.92□□□□□ -0.34
UBE3D-204ENST00000430071 MFSD2BA6NFX1 497 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 GP9P14770 177 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 ATP5G2Q06055 141 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 EXOSC2Q13868 293 aaKnown RBP12.91□□□□□ -0.34
UBE3D-204ENST00000430071 OXA1LQ15070 435 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 DTD1Q8TEA8 209 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 MAGT1Q9H0U3 335 aa12.91□□□□□ -0.34
UBE3D-204ENST00000430071 FAM25EA8MYX2 175 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 SNCAP37840 140 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 ID3Q02535 119 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 PVRIGQ6DKI7 326 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 SBSPONQ8IVN8 264 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 OR1L6Q8NGR2 347 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 TMEM170AQ8WVE7 144 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 OR4C12Q96R67 309 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 PEF1Q9UBV8 284 aaKnown RBP12.9□□□□□ -0.34
UBE3D-204ENST00000430071 ALG5Q9Y673 324 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
UBE3D-204ENST00000430071 C5orf51A6NDU8 294 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 K7EIM0 57 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 IGHV3-23P01764 117 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 IAPPP10997 89 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 CCDC140Q96MF4 163 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 GSKIPQ9P0R6 139 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 U3KQK5 164 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 DNAH7Q8WXX0 4024 aa12.89□□□□□ -0.35
UBE3D-204ENST00000430071 IGHV3-21A0A0B4J1V1 117 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 BMPR1BO00238 502 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 CYB5BO43169 146 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 SYNGR2O43760 224 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 SIX6O95475 246 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 HTR2BP41595 481 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 NKX2-1P43699 371 aaPredicted RBP12.88□□□□□ -0.35
UBE3D-204ENST00000430071 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBE3D-204ENST00000430071 Q8N1Y9 231 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 THYN1Q9P016 225 aa12.88□□□□□ -0.35
UBE3D-204ENST00000430071 IZUMO1RA6ND01 250 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 I3L2K1 104 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 GOSR2O14653 212 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms