RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 OR1L6Q8NGR2 347 aa13.6□□□□□ -0.23
SSR4P1-202ENST00000429427 MISP3Q96FF7 219 aa13.6□□□□□ -0.23
SSR4P1-202ENST00000429427 WWC2-AS2Q96NR7 200 aa13.6□□□□□ -0.23
SSR4P1-202ENST00000429427 ATP6V0BQ99437 205 aa13.6□□□□□ -0.23
SSR4P1-202ENST00000429427 MT-CO2P00403 227 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 ETV6P41212 452 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 CD81P60033 236 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 PYDC2Q56P42 97 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 SGPP2Q8IWX5 399 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 UBAC2Q8NBM4 344 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 RBPMSQ93062 196 aaKnown RBP13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 TM2D3Q9BRN9 247 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 TMEM56-RWDD3S4R434 201 aa13.59□□□□□ -0.23
SSR4P1-202ENST00000429427 ATG12O94817 140 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 RNASE2P10153 161 aaKnown RBP13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 FCGR2BP31994 310 aaPredicted RBP13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 TMEM187Q14656 261 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 Q56UQ5 140 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 TMEM268Q5VZI3 342 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 ZNF57Q68EA5 555 aaPredicted RBP13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 SPSB3Q6PJ21 355 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 SLC35G3Q8N808 338 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 GPR146Q96CH1 333 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 RRNAD1Q96FB5 475 aaKnown RBP13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 GALNT14Q96FL9 552 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 RCHY1Q96PM5 261 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 NEURL2Q9BR09 285 aa13.58□□□□□ -0.24
SSR4P1-202ENST00000429427 NDUFA4O00483 81 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 IFNA17P01571 189 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 ELLP55199 621 aaPredicted RBP13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 ERHP84090 104 aaKnown RBP13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 GUCA2BQ16661 112 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 LINC00322Q6ZN03 302 aaPredicted RBP13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 DEFB125Q8N687 156 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 PINX1Q96BK5 328 aaKnown RBP13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 MRPL36Q9P0J6 103 aaKnown RBP13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 CACNG5Q9UF02 275 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 SCP2D1Q9UJQ7 156 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 UFC1Q9Y3C8 167 aa13.57□□□□□ -0.24
SSR4P1-202ENST00000429427 SCAF4O95104 1147 aaKnown RBP13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 DHODHQ02127 395 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 HAGHQ16775 308 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 FAM219AQ8IW50 185 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 MARC2Q969Z3 335 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 SRRQ9GZT4 340 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 PALMDQ9NP74 551 aa13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 DAZ1Q9NQZ3 744 aaKnown RBP13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 MRPL27Q9P0M9 148 aaKnown RBP13.56□□□□□ -0.24
SSR4P1-202ENST00000429427 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 S100A5P33763 92 aa13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 HOXA1P49639 335 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 MFAP4P55083 255 aa13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 TOMM5Q8N4H5 51 aa13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 RNASE11Q8TAA1 199 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 TMEM170AQ8WVE7 144 aa13.55□□□□□ -0.24
SSR4P1-202ENST00000429427 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 AKR1C4P17516 323 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 SPCS3P61009 180 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 MLANAQ16655 118 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 NMSQ5H8A3 153 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 OR52E5Q8NH55 327 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 IL22RA2Q969J5 263 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 TXN2Q99757 166 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 C20orf24Q9BUV8 137 aa13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.54□□□□□ -0.24
SSR4P1-202ENST00000429427 SNCAP37840 140 aa13.53□□□□□ -0.24
SSR4P1-202ENST00000429427 LYZL2Q7Z4W2 148 aa13.53□□□□□ -0.24
SSR4P1-202ENST00000429427 OR10C1Q96KK4 312 aa13.53□□□□□ -0.24
SSR4P1-202ENST00000429427 PDCD10Q9BUL8 212 aa13.53□□□□□ -0.24
SSR4P1-202ENST00000429427 C15orf62A8K5M9 175 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 OR11H12B2RN74 326 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 K7EMT4 169 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 NUPL2O15504 423 aaKnown RBP13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 NXPH3O95157 252 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 BAK1Q16611 211 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 CITED4Q96RK1 184 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 RYR3Q15413 4870 aa13.52□□□□□ -0.25
SSR4P1-202ENST00000429427 TRAV25A0A0B4J276 109 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 FAUP35544 74 aaKnown RBP13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 AP3S2P59780 193 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 TMED4Q7Z7H5 227 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 SCGB3A2Q96PL1 93 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 SRD5A3Q9H8P0 318 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 RETNQ9HD89 108 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 KCNIP3Q9Y2W7 256 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
SSR4P1-202ENST00000429427 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 A0A0B4J2A0 478 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms