RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ERHP84090 104 aaKnown RBP12.63□□□□□ -0.39
TRIM39-209ENST00000428728 TNFRSF9Q07011 255 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 MZT2AQ6P582 158 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 KIR2DL5AQ8N109 375 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 SLC35G3Q8N808 338 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 KIR2DL5BQ8NHK3 375 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 GALNT14Q96FL9 552 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 TP53RKQ96S44 253 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 TXN2Q99757 166 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 NXF2Q9GZY0 626 aaKnown RBP12.63□□□□□ -0.39
TRIM39-209ENST00000428728 NAA50Q9GZZ1 169 aaKnown RBP12.63□□□□□ -0.39
TRIM39-209ENST00000428728 KLK11Q9UBX7 282 aa12.63□□□□□ -0.39
TRIM39-209ENST00000428728 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 CD3DP04234 171 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 RND3P61587 244 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 GBGT1Q8N5D6 347 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 OR52I2Q8NH67 350 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 RNF183Q96D59 192 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
TRIM39-209ENST00000428728 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
TRIM39-209ENST00000428728 NUPR2A6NF83 97 aa12.61□□□□□ -0.39
TRIM39-209ENST00000428728 ST8SIA3O43173 380 aa12.61□□□□□ -0.39
TRIM39-209ENST00000428728 LHFPL1Q86WI0 220 aa12.61□□□□□ -0.39
TRIM39-209ENST00000428728 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-209ENST00000428728 GINS3Q9BRX5 216 aa12.61□□□□□ -0.39
TRIM39-209ENST00000428728 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-209ENST00000428728 HYDINQ4G0P3 5121 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 LY6G6CO95867 125 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 IFNA17P01571 189 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 SNCAP37840 140 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 TRIM16LQ309B1 348 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 TCF24Q7RTU0 167 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 ARRDC1Q8N5I2 433 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 ST8SIA2Q92186 375 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 AP3S1Q92572 193 aa12.6□□□□□ -0.39
TRIM39-209ENST00000428728 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 GABARAPO95166 117 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
TRIM39-209ENST00000428728 CTF1Q16619 201 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 SP6Q3SY56 376 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 DUSP18Q8NEJ0 188 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
TRIM39-209ENST00000428728 PDCD10Q9BUL8 212 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 COPZ2Q9P299 210 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
TRIM39-209ENST00000428728 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM39-209ENST00000428728 A0A0B4J293 547 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-209ENST00000428728 P0C879 139 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 ZNF182P17025 639 aaPredicted RBP12.58□□□□□ -0.4
TRIM39-209ENST00000428728 ETV6P41212 452 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 NPBWR1P48145 328 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 FAM90A2PQ658T7 463 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 CCDC71LQ8N9Z2 235 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 OR13C8Q8NGS7 320 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 ABHD1Q96SE0 405 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 EPPK1P58107 5090 aaKnown RBP12.58□□□□□ -0.4
TRIM39-209ENST00000428728 AGRNO00468 2067 aa12.58□□□□□ -0.4
TRIM39-209ENST00000428728 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 ATG12O94817 140 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 RNASE2P10153 161 aaKnown RBP12.57□□□□□ -0.4
TRIM39-209ENST00000428728 TBPP20226 339 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
TRIM39-209ENST00000428728 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 ENY2Q9NPA8 101 aa12.57□□□□□ -0.4
TRIM39-209ENST00000428728 A0A1B0GU03 582 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 MPTX1A8MV57 137 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 DNASE2O00115 360 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-209ENST00000428728 RAB3DO95716 219 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 OPRK1P41145 380 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 CMC4P56277 68 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-209ENST00000428728 TAS2R19P59542 299 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 RPL11P62913 178 aaKnown RBP12.56□□□□□ -0.4
TRIM39-209ENST00000428728 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 ZFAND1Q8TCF1 268 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 RRNAD1Q96FB5 475 aaKnown RBP12.56□□□□□ -0.4
TRIM39-209ENST00000428728 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
TRIM39-209ENST00000428728 INS-IGF2F8WCM5 200 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 CORTO00230 105 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 RGS5O15539 181 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 DFFBO76075 338 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 TMEM50AO95807 157 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 UCP1P25874 307 aa12.55□□□□□ -0.4
TRIM39-209ENST00000428728 SUB1P53999 127 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM39-209ENST00000428728 LEMD1Q68G75 181 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms