RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 A0A0B4J293 547 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
SEC13-210ENST00000428626 YIF1AO95070 293 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 APOHP02749 345 aaPredicted RBP11.42□□□□□ -0.58
SEC13-210ENST00000428626 MFAP4P55083 255 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 LHFPL1Q86WI0 220 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 STPG3Q8N7X2 389 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
SEC13-210ENST00000428626 GALNT14Q96FL9 552 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 TP53RKQ96S44 253 aa11.42□□□□□ -0.58
SEC13-210ENST00000428626 SMIM31A0A1B0GVY4 71 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 LY6G6CO95867 125 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 RND3P61587 244 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 RELQ04864 619 aaPredicted RBP11.41□□□□□ -0.58
SEC13-210ENST00000428626 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
SEC13-210ENST00000428626 TOMM20LQ6UXN7 152 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 OR4D10Q8NGI6 311 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 TXN2Q99757 166 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 VCX3AQ9NNX9 186 aa11.41□□□□□ -0.58
SEC13-210ENST00000428626 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
SEC13-210ENST00000428626 TRAV14DV4A0A0A6YYC5 116 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 CD3DP04234 171 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 S100GP29377 79 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 PVRIGQ6DKI7 326 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 OR52I2Q8NH67 350 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 ST8SIA2Q92186 375 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 ABHD1Q96SE0 405 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.58
SEC13-210ENST00000428626 AGRNO00468 2067 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 A0A1B0GU03 582 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 ST8SIA3O43173 380 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 GNG7O60262 68 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 ATF4P18848 351 aaPredicted RBP11.39□□□□□ -0.59
SEC13-210ENST00000428626 PIGPP57054 158 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 CTF1Q16619 201 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 MLANAQ16655 118 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 FAM24BQ8N5W8 94 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 DNAH10Q8IVF4 4471 aa11.39□□□□□ -0.59
SEC13-210ENST00000428626 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 SMIM18P0DKX4 95 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 RNASE2P10153 161 aaKnown RBP11.38□□□□□ -0.59
SEC13-210ENST00000428626 PGAM2P15259 253 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 RORCP51449 518 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 ERHP84090 104 aaKnown RBP11.38□□□□□ -0.59
SEC13-210ENST00000428626 SP6Q3SY56 376 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 CSTL1Q9H114 145 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
SEC13-210ENST00000428626 MTFP1Q9UDX5 166 aa11.38□□□□□ -0.59
SEC13-210ENST00000428626 PUS1Q9Y606 427 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEC13-210ENST00000428626 FAM25AB3EWG3 89 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 FAM25CB3EWG5 89 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 FAM25GB3EWG6 89 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 INS-IGF2F8WCM5 200 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 DFFBO76075 338 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 TMEM50AO95807 157 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 ETV6P41212 452 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 PPP5CP53041 499 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 RNASE10Q5GAN6 216 aaKnown RBP11.37□□□□□ -0.59
SEC13-210ENST00000428626 Q6ZRM9 215 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
SEC13-210ENST00000428626 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
SEC13-210ENST00000428626 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 GABARAPO95166 117 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 AKR1C2P52895 323 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 ARRDC1Q8N5I2 433 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 RPP25LQ8N5L8 163 aaKnown RBP11.36□□□□□ -0.59
SEC13-210ENST00000428626 DUSP18Q8NEJ0 188 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 OR13C8Q8NGS7 320 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
SEC13-210ENST00000428626 MIXL1Q9H2W2 232 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 EXTL2Q9UBQ6 330 aa11.36□□□□□ -0.59
SEC13-210ENST00000428626 VPS13DQ5THJ4 4388 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 MPTX1A8MV57 137 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 IFNA17P01571 189 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 CD74P04233 296 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 UCP1P25874 307 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 NPBWR1P48145 328 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
SEC13-210ENST00000428626 LEMD1Q68G75 181 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 SLC35G3Q8N808 338 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 RARRES2Q99969 163 aa11.35□□□□□ -0.59
SEC13-210ENST00000428626 DEFB4AO15263 64 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 DEDDO75618 318 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
SEC13-210ENST00000428626 ZNF182P17025 639 aaPredicted RBP11.34□□□□□ -0.59
SEC13-210ENST00000428626 SNCAP37840 140 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 DEFB131AP59861 70 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 BSXQ3C1V8 233 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 MZT2AQ6P582 158 aa11.34□□□□□ -0.59
SEC13-210ENST00000428626 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms