RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MLXQ9UH92 298 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 SLC45A2Q9UMX9 530 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 ZNF462Q96JM2 2506 aa8.35□□□□□ -1.07
HDAC9-210ENST00000428307 EPG5Q9HCE0 2579 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 DOPEY1Q5JWR5 2465 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 M0R1W7 72 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 FOXH1O75593 365 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 LINC00869P0C866 280 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 RPL27AP46776 148 aaKnown RBP8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-210ENST00000428307 FAM78BQ5VT40 261 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SPNS3Q6ZMD2 512 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SLC16A13Q7RTY0 426 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 VMO1Q7Z5L0 202 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 OR51G1Q8NGK1 321 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SMIM7Q9BQ49 75 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 MANBALQ9NQG1 85 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 KCNIP2Q9NS61 270 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 CRYBG3Q68DQ2 2970 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 IGHV3-21A0A0B4J1V1 117 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 IGLC7A0M8Q6 106 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 FNDC10F2Z333 226 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 INS-IGF2F8WCM5 200 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 VENTXO95231 258 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 OR2C1O95371 312 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 CRYGBP07316 175 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 STAG3L2P0CL84 134 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 STAG3L3P0CL85 134 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 RNF224P0DH78 156 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SUB1P53999 127 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC9-210ENST00000428307 MMDQ15546 238 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 C15orf54Q8N8G6 183 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 CACNG8Q8WXS5 425 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 NPIPB3Q92617 1050 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 HIST1H2BAQ96A08 127 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 SLC35E1Q96K37 410 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
HDAC9-210ENST00000428307 IGHV2-5P01817 119 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 ATP5G3P48201 142 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 COMPP49747 757 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-210ENST00000428307 LGALS4P56470 323 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 RHOBP62745 196 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 HES1Q14469 280 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 ZFP82Q8N141 532 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 MISP3Q96FF7 219 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 LPAR2Q9HBW0 351 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 MRPL36Q9P0J6 103 aaKnown RBP8.33□□□□□ -1.08
HDAC9-210ENST00000428307 CXorf1O96002 111 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 GPX4P36969 197 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-210ENST00000428307 CEACAM3P40198 252 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 FBLN7Q53RD9 439 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 RUSC1-AS1Q66K80 236 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 MIR17HGQ75NE6 70 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 RNASEH2CQ8TDP1 164 aaKnown RBP8.33□□□□□ -1.08
HDAC9-210ENST00000428307 PARLQ9H300 379 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 TUBA4BQ9H853 241 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 SDF2L1Q9HCN8 221 aa8.33□□□□□ -1.08
HDAC9-210ENST00000428307 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 OVOL3O00110 214 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 NPPCP23582 126 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 MFAP2P55001 183 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 ZNF90Q03938 601 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 ZNF343Q6P1L6 599 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 DYNAPQ8N1N2 210 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 ODF3BA8MYP8 253 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 CNIH1O95406 144 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 LMO4P61968 165 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 ADIRFQ15847 76 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
HDAC9-210ENST00000428307 CFHR4Q92496 578 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 BBC3Q96PG8 261 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-210ENST00000428307 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 DOK5Q9P104 306 aa8.32□□□□□ -1.08
HDAC9-210ENST00000428307 FAM208BQ5VWN6 2430 aa8.31□□□□□ -1.08
HDAC9-210ENST00000428307 MT-ND4LP03901 98 aa8.31□□□□□ -1.08
HDAC9-210ENST00000428307 RND2P52198 227 aa8.31□□□□□ -1.08
HDAC9-210ENST00000428307 C1orf122Q6ZSJ8 110 aa8.31□□□□□ -1.08
HDAC9-210ENST00000428307 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
HDAC9-210ENST00000428307 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 TOX4O94842 621 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 NDUFB4O95168 129 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 HOXB4P17483 251 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 GCHFRP30047 84 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 PAX2Q02962 417 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 PNRC1Q12796 327 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 OR5T1Q8NG75 326 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 NANPQ8TBE9 248 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 EAF1Q96JC9 268 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 FAM103A1Q9BTL3 118 aaKnown RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 DERL1Q9BUN8 251 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 NAT8Q9UHE5 227 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 NBR2O15453 112 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms