RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MRPL41Q8IXM3 137 aaKnown RBP17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 OR4F5Q8NH21 305 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 ISOC2Q96AB3 205 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 OR4F4Q96R69 305 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 RNF5Q99942 180 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 SIRPDQ9H106 197 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 IGHV2-70DA0A0C4DH43 119 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 LMO4P61968 165 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 RHOBP62745 196 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 SSX2Q16385 188 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 C19orf35Q6ZS72 473 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 CCL19Q99731 98 aa17.41■□□□□ 0.38
CNEP1R1-202ENST00000427478 FCN1O00602 326 aa17.4■□□□□ 0.38
CNEP1R1-202ENST00000427478 UBE2G2P60604 165 aa17.4■□□□□ 0.38
CNEP1R1-202ENST00000427478 TMEM249Q2WGJ8 235 aa17.4■□□□□ 0.38
CNEP1R1-202ENST00000427478 SPNS3Q6ZMD2 512 aa17.4■□□□□ 0.38
CNEP1R1-202ENST00000427478 COLCA2A8K830 154 aa17.39■□□□□ 0.38
CNEP1R1-202ENST00000427478 CXorf1O96002 111 aa17.39■□□□□ 0.38
CNEP1R1-202ENST00000427478 SSBP2P81877 361 aaPredicted RBP17.39■□□□□ 0.38
CNEP1R1-202ENST00000427478 ZNF727A8MUV8 499 aa17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 GOSR1O95249 250 aa17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 PDLIM4P50479 330 aa17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 HABP2Q14520 560 aaPredicted RBP17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 C15orf54Q8N8G6 183 aa17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 MISP3Q96FF7 219 aa17.39■□□□□ 0.37
CNEP1R1-202ENST00000427478 AKAP6Q13023 2319 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 TEX22C9J3V5 150 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 MFAP2P55001 183 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 ZNF674Q2M3X9 581 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 FBLN7Q53RD9 439 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 DYNAPQ8N1N2 210 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 ZNF114Q8NC26 417 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 C17orf50Q8WW18 174 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 SRSF12Q8WXF0 261 aaKnown RBP17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 RPUSD4Q96CM3 377 aaKnown RBP17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 C11orf94C9JXX5 98 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 TOX4O94842 621 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 MOSP00540 346 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 HES1Q14469 280 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 FAM78BQ5VT40 261 aa17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 MRPL36Q9P0J6 103 aaKnown RBP17.38■□□□□ 0.37
CNEP1R1-202ENST00000427478 TMEM250H0YL14 139 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 NBR2O15453 112 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 LGALS4P56470 323 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 MIR17HGQ75NE6 70 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 NPIPB3Q92617 1050 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 EAF1Q96JC9 268 aaPredicted RBP17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 TUBA4BQ9H853 241 aa17.37■□□□□ 0.37
CNEP1R1-202ENST00000427478 FOXH1O75593 365 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 ATP5G3P48201 142 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 CST9LP1Q5W188 147 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 CYP2G1PQ6ZSU1 146 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 SMIM7Q9BQ49 75 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 KIAA0141Q14154 515 aaPredicted RBP17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 LPAR2Q9HBW0 351 aa17.36■□□□□ 0.37
CNEP1R1-202ENST00000427478 CNIH1O95406 144 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 RND2P52198 227 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 CCDC144NLQ6NUI1 221 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 TBX15Q96SF7 602 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 PARLQ9H300 379 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 SDF2L1Q9HCN8 221 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 FUT9Q9Y231 359 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 OR2C1O95371 312 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 GCHFRP30047 84 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 PNRC1Q12796 327 aaPredicted RBP17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 MINOS1Q5TGZ0 78 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 PVRIGQ6DKI7 326 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 HIST1H2BAQ96A08 127 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 MINOS1-NBL1R4GNA1 71 aa17.35■□□□□ 0.37
CNEP1R1-202ENST00000427478 NDUFA3O95167 84 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 RUSC1-AS1Q66K80 236 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 OR2T10Q8NGZ9 312 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 OR1P1Q8NH06 330 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 NANPQ8TBE9 248 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 SLC25A33Q9BSK2 321 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 F11RQ9Y624 299 aaKnown RBP17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 WNK2Q9Y3S1 2297 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 COL12A1Q99715 3063 aa17.34■□□□□ 0.37
CNEP1R1-202ENST00000427478 IGKV1D-37A0A075B6S9 117 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 A0A087WWC5 75 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 MT-CO2P00403 227 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 ZNF90Q03938 601 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 ETFRF1Q6IPR1 90 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 FAM24BQ8N5W8 94 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 NPBQ8NG41 125 aa17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 KLF2Q9Y5W3 355 aaPredicted RBP17.33■□□□□ 0.37
CNEP1R1-202ENST00000427478 IGHV3-21A0A0B4J1V1 117 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 OOSP1A8MZH6 123 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 NDUFS6O75380 124 aaKnown RBP17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 CRYBA1P05813 215 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 ZNF843Q8N446 348 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 THAP8Q8NA92 274 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 OR51G1Q8NGK1 321 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 FAM168AQ92567 244 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 SPOCK3Q9BQ16 436 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 NAT8Q9UHE5 227 aa17.33■□□□□ 0.36
CNEP1R1-202ENST00000427478 TCRBV4S1A1TA0A5B7 111 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 PIMREGQ9BSJ6 248 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 DMRT1Q9Y5R6 373 aa17.32■□□□□ 0.36
CNEP1R1-202ENST00000427478 ASH1LQ9NR48 2969 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms