RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 ANKRD20A5PA0PJZ0 165 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 GSTZ1O43708 216 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 MRPS10P82664 201 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 GUCA2BQ16661 112 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TRIM63Q969Q1 353 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TMEM222Q9H0R3 208 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 FNDC4Q9H6D8 234 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 ZFAND3Q9H8U3 227 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 GPR132Q9UNW8 380 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 UFC1Q9Y3C8 167 aa11.87□□□□□ -0.51
HLA-DQB2-230ENST00000427449 K7EMT4 169 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TSPAN4O14817 238 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 CDS2O95674 445 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 MT-CO2P00403 227 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 PGAM2P15259 253 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 FAM90A2PQ658T7 463 aa11.86□□□□□ -0.51
HLA-DQB2-230ENST00000427449 CRYM-AS1A6NIL9 109 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 RGS5O15539 181 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 ZNF207O43670 478 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 IFNA6P05013 189 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 OR1L6Q8NGR2 347 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 OR4A16Q8NH70 328 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 C15orf40Q8WUR7 153 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TUBA4BQ9H853 241 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 V9GYH0 126 aa11.85□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TNFSF8P32971 234 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 RPL5P46777 297 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 ZNF79Q15937 498 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 TXN2Q99757 166 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
HLA-DQB2-230ENST00000427449 IGHV7-4-1A0A0J9YVY3 117 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 A0A1B0GU03 582 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 CHEK1O14757 476 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 S100GP29377 79 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 MEF2DQ14814 521 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 Q56UQ5 140 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 LILRB2Q8N423 598 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 UBAC2Q8NBM4 344 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 OR51S1Q8NGJ8 323 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 OR52B4Q8NGK2 314 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 ZFAND1Q8TCF1 268 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 RNF2Q99496 336 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
HLA-DQB2-230ENST00000427449 CYB5BO43169 146 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 AKAIN1P0CW23 69 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 LYL1P12980 280 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 AKR1C2P52895 323 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 EWSR1Q01844 656 aaKnown RBP eCLIP11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 KLF9Q13886 244 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 IL18Q14116 193 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TMEM187Q14656 261 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 CCDC71LQ8N9Z2 235 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 COPZ2Q9P299 210 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 AGRNO00468 2067 aa11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TEX13DA0A0J9YY54 714 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 LCE6AA0A183 80 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 ETV6P41212 452 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 MFAP4P55083 255 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 ZNF124Q15973 351 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 MLANAQ16655 118 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 SLC16A13Q7RTY0 426 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 GPR146Q96CH1 333 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 GALNT14Q96FL9 552 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 GGTLC1Q9BX51 225 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 UBQLN2Q9UHD9 624 aa11.81□□□□□ -0.52
HLA-DQB2-230ENST00000427449 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 IGKV1-17P01599 117 aa11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TRIM16LQ309B1 348 aa11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 OR52E5Q8NH55 327 aa11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB2-230ENST00000427449 NXPH3O95157 252 aa11.79□□□□□ -0.52
HLA-DQB2-230ENST00000427449 TMEM50AO95807 157 aa11.79□□□□□ -0.52
HLA-DQB2-230ENST00000427449 FAM219AQ8IW50 185 aa11.79□□□□□ -0.52
HLA-DQB2-230ENST00000427449 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms