RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 MTFP1Q9UDX5 166 aa15.41■□□□□ 0.06
UBXN4-204ENST00000426921 FAM25AB3EWG3 89 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 FAM25CB3EWG5 89 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 FAM25GB3EWG6 89 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 CD3DP04234 171 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 PIGPP57054 158 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 FAM90A2PQ658T7 463 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 LYG2Q86SG7 212 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 STPG3Q8N7X2 389 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 RNF183Q96D59 192 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 TP53RKQ96S44 253 aa15.4■□□□□ 0.06
UBXN4-204ENST00000426921 NAA50Q9GZZ1 169 aaKnown RBP15.4■□□□□ 0.06
UBXN4-204ENST00000426921 A0A0B4J293 547 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 A0A0J9YWU9 116 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 GNG7O60262 68 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 SMIM18P0DKX4 95 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 PGAM2P15259 253 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 ZNF182P17025 639 aaPredicted RBP15.39■□□□□ 0.05
UBXN4-204ENST00000426921 PI3P19957 117 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 IZUMO4Q1ZYL8 232 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 MAP6D1Q9H9H5 199 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 EXTL2Q9UBQ6 330 aa15.39■□□□□ 0.05
UBXN4-204ENST00000426921 TRAV14DV4A0A0A6YYC5 116 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 YIF1AO95070 293 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 IGHV3-48P01763 117 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 CD74P04233 296 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 EWSR1Q01844 656 aaKnown RBP eCLIP15.38■□□□□ 0.05
UBXN4-204ENST00000426921 RNASE12Q5GAN4 147 aaKnown RBP15.38■□□□□ 0.05
UBXN4-204ENST00000426921 C15orf40Q8WUR7 153 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 PINX1Q96BK5 328 aaKnown RBP15.38■□□□□ 0.05
UBXN4-204ENST00000426921 ABHD1Q96SE0 405 aa15.38■□□□□ 0.05
UBXN4-204ENST00000426921 C3orf85A0A1B0GTC6 90 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 ST8SIA3O43173 380 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 ATG12O94817 140 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 NPBWR1P48145 328 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 AKR1C2P52895 323 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 CMC4P56277 68 aaPredicted RBP15.37■□□□□ 0.05
UBXN4-204ENST00000426921 SPINK9Q5DT21 86 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 GINS3Q9BRX5 216 aa15.37■□□□□ 0.05
UBXN4-204ENST00000426921 NUPR2A6NF83 97 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 B3GALNT1O75752 331 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 CD5P06127 495 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 RPL35AP18077 110 aaKnown RBP15.36■□□□□ 0.05
UBXN4-204ENST00000426921 UCP1P25874 307 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 PPP5CP53041 499 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 TOMM20LQ6UXN7 152 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 APRG1Q8IVJ8 170 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 SLC35G3Q8N808 338 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 TMEM229BQ8NBD8 167 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 DUSP18Q8NEJ0 188 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 OR4D10Q8NGI6 311 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 TERB2Q8NHR7 220 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 LINC00476Q8WZB0 136 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 C6orf62Q9GZU0 229 aaPredicted RBP15.36■□□□□ 0.05
UBXN4-204ENST00000426921 VSIRQ9H7M9 311 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 ZFAND3Q9H8U3 227 aa15.36■□□□□ 0.05
UBXN4-204ENST00000426921 IGHV3-49A0A0A0MS15 119 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 CXorf65A6NEN9 183 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 CORTO00230 105 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 SNCAP37840 140 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 TAS2R19P59542 299 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 ZNF600Q6ZNG1 722 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 CCDC71LQ8N9Z2 235 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 ZFAND1Q8TCF1 268 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 COPZ2Q9P299 210 aa15.35■□□□□ 0.05
UBXN4-204ENST00000426921 IFNA17P01571 189 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 RNASE2P10153 161 aaKnown RBP15.34■□□□□ 0.05
UBXN4-204ENST00000426921 SSBP1Q04837 148 aaKnown RBP15.34■□□□□ 0.05
UBXN4-204ENST00000426921 PMS2P11Q13670 270 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 ZNF124Q15973 351 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 BSXQ3C1V8 233 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 AARDQ4LEZ3 155 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 GPR107Q5VW38 600 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 OR13C8Q8NGS7 320 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 MIXL1Q9H2W2 232 aa15.34■□□□□ 0.05
UBXN4-204ENST00000426921 GABARAPH6UMI1 98 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 TRIM16LQ309B1 348 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 TCF24Q7RTU0 167 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 TMEM217Q8N7C4 229 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 ST8SIA2Q92186 375 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 PDCD10Q9BUL8 212 aa15.33■□□□□ 0.04
UBXN4-204ENST00000426921 PUS1Q9Y606 427 aaKnown RBP eCLIP15.33■□□□□ 0.04
UBXN4-204ENST00000426921 IGHV3OR16-13A0A075B7E8 117 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 IGHV3-74A0A0B4J1X5 117 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 TRAV2A0A0B4J234 112 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 A0A0G2JRQ6 117 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 RAB3DO95716 219 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 TMEM50AO95807 157 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 RPL5P46777 297 aaKnown RBP15.32■□□□□ 0.04
UBXN4-204ENST00000426921 TFPI2P48307 235 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 HOXA1P49639 335 aaPredicted RBP15.32■□□□□ 0.04
UBXN4-204ENST00000426921 SUB1P53999 127 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBXN4-204ENST00000426921 PAFAH1B2P68402 229 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 MRPS10P82664 201 aaKnown RBP15.32■□□□□ 0.04
UBXN4-204ENST00000426921 SP6Q3SY56 376 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 STEAP1BQ6NZ63 245 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 CEMP1Q6PRD7 247 aaPredicted RBP15.32■□□□□ 0.04
UBXN4-204ENST00000426921 FAM219AQ8IW50 185 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 GATAD1Q8WUU5 269 aa15.32■□□□□ 0.04
UBXN4-204ENST00000426921 RRNAD1Q96FB5 475 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms