RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 IGLV11-55A0A075B6I3 123 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 PIGBOS1A0A0B4J2F0 54 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 A0A0G2JLM5 398 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 MPTX1A8MV57 137 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 INMT-MINDY4F8WBC2 141 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 ADAP1O75689 374 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 OR2J3O76001 311 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 IFNA17P01571 189 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 IGHV3-11P01762 117 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SULT1A3P0DMM9 295 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SULT1A4P0DMN0 295 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SLC25A6P12236 298 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 MYCNOSP40205 109 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SPCS3P61009 180 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 RHOGP84095 191 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 DEFA5Q01523 94 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SMCO1Q147U7 214 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 C2orf68Q2NKX9 166 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 SPINK9Q5DT21 86 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 PVRIGQ6DKI7 326 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 ZNF343Q6P1L6 599 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 NECAP1Q8NC96 275 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 KLHL30-AS1Q8NEE0 82 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 WFDC9Q8NEX5 89 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 OR4F17Q8NGA8 305 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 COQ8AQ8NI60 647 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 ENKURQ8TC29 256 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 ZNF431Q8TF32 576 aaPredicted RBP5.72□□□□□ -1.49
LINC01049-201ENST00000426840 C4orf3Q8WVX3 66 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 USMG5Q96IX5 58 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 DUX3Q96PT4 197 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 OR5B12Q96R08 314 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 OR4F4Q96R69 305 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 P2RX4Q99571 388 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 TMED3Q9Y3Q3 217 aa5.72□□□□□ -1.49
LINC01049-201ENST00000426840 F11RQ9Y624 299 aaKnown RBP5.72□□□□□ -1.49
LINC01049-201ENST00000426840 FAM223BA6NKX1 122 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 CCL24O00175 119 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 DHFRP00374 187 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 LGALS1P09382 135 aaKnown RBP5.71□□□□□ -1.5
LINC01049-201ENST00000426840 HIST1H1BP16401 226 aaKnown RBP5.71□□□□□ -1.5
LINC01049-201ENST00000426840 ERHP84090 104 aaKnown RBP5.71□□□□□ -1.5
LINC01049-201ENST00000426840 ATP5G2Q06055 141 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 FHL3Q13643 280 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 DEFB136Q30KP8 78 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 BSXQ3C1V8 233 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 C11orf87Q6NUJ2 197 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 SLC25A24Q6NUK1 477 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 PLET1Q6UQ28 207 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 FAM223AQ8IWN6 122 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 C12orf45Q8N5I9 185 aaPredicted RBP5.71□□□□□ -1.5
LINC01049-201ENST00000426840 OR1N2Q8NGR9 330 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 OR1P1Q8NH06 330 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 PLEKHA3Q9HB20 300 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 PALMDQ9NP74 551 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 HSPB7Q9UBY9 170 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 CMYA5Q8N3K9 4069 aa5.71□□□□□ -1.5
LINC01049-201ENST00000426840 C13orf42A0A1B0GVH6 325 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 SNRPGP15A8MWD9 76 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 K7EIM0 57 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 NXPH3O95157 252 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 IFNA21P01568 189 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 TRBV12-3P01733 135 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 HSPB1P04792 205 aaKnown RBP5.7□□□□□ -1.5
LINC01049-201ENST00000426840 RNASE2P10153 161 aaKnown RBP5.7□□□□□ -1.5
LINC01049-201ENST00000426840 DEFA4P12838 97 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 TNFRSF9Q07011 255 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 ZNF114Q8NC26 417 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 OR11H1Q8NG94 326 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 OR4D5Q8NGN0 318 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 OR1L6Q8NGR2 347 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 OR1S1Q8NH92 325 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 TMEM170AQ8WVE7 144 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 OR10C1Q96KK4 312 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 PDCD10Q9BUL8 212 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 RBKSQ9H477 322 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 CACFD1Q9UGQ2 172 aa5.7□□□□□ -1.5
LINC01049-201ENST00000426840 IGHV4OR15-8A0A075B7B6 117 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 A0A087WW49 117 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 MFSD2BA6NFX1 497 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 CEBPZOSA8MTT3 80 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 FAM90A26D6RGX4 464 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 LINC01619G3V211 115 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 I3L2K1 104 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 CCSO14618 274 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 PRAF2O60831 178 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 SCGB1D2O95969 90 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 PTTG1O95997 202 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 IGHV3-23P01764 117 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 SNCAP37840 140 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 HOXA1P49639 335 aaPredicted RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 ZNF616Q08AN1 781 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 IL15RAQ13261 267 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 DCTN2Q13561 401 aaKnown RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 EXOSC2Q13868 293 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms