RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 MFAP4P55083 255 aa13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 AP3S2P59780 193 aa13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 TMEM190Q8WZ59 177 aa13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 RBPMSQ93062 196 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 RBM38Q9H0Z9 239 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
SLC6A1-202ENST00000425938 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 NDUFA4O00483 81 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 NUPL2O15504 423 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 MT-CO2P00403 227 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 HOXA1P49639 335 aaPredicted RBP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 BTNL8Q6UX41 500 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 PINX1Q96BK5 328 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 TXN2Q99757 166 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 DAZ1Q9NQZ3 744 aaKnown RBP13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 MLXQ9UH92 298 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
SLC6A1-202ENST00000425938 F8W735 103 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 I3L2K1 104 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 C8orf88P0DMB2 117 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 ETV6P41212 452 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 TMEM268Q5VZI3 342 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 SELENOHQ8IZQ5 122 aaKnown RBP13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 TOMM5Q8N4H5 51 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 C20orf24Q9BUV8 137 aa13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.18□□□□□ -0.3
SLC6A1-202ENST00000425938 A0A0G2JRQ6 117 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 CORTO00230 105 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 SPCS3P61009 180 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 ANKRD55Q3KP44 614 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 RBPMS2Q6ZRY4 209 aaKnown RBP13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 SLC16A13Q7RTY0 426 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 LHFPL5Q8TAF8 219 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 TRIM63Q969Q1 353 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 SELENOKQ9Y6D0 94 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 V9GYH0 126 aa13.17□□□□□ -0.3
SLC6A1-202ENST00000425938 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 GNG7O60262 68 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 CTSGP08311 255 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 CD7P09564 240 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 ANXA3P12429 323 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 AKR1C4P17516 323 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 ADMP35318 185 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 KLF9Q13886 244 aaPredicted RBP13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 Q6ZRM9 215 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 DUSP18Q8NEJ0 188 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 OR52E5Q8NH55 327 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 IL22RA2Q969J5 263 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 CACNG5Q9UF02 275 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 CACFD1Q9UGQ2 172 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 TMEM56-RWDD3S4R434 201 aa13.16□□□□□ -0.3
SLC6A1-202ENST00000425938 K7EMT4 169 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 YIF1AO95070 293 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 SCAF4O95104 1147 aaKnown RBP13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 IGHV3-48P01763 117 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 NPBWR1P48145 328 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 ZNF79Q15937 498 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 AARDQ4LEZ3 155 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 CCDC190Q86UF4 302 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 TMEM230Q96A57 120 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 GPR146Q96CH1 333 aa13.15□□□□□ -0.3
SLC6A1-202ENST00000425938 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 C15orf62A8K5M9 175 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 RNASE2P10153 161 aaKnown RBP13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 SRPXP78539 464 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 TMEM187Q14656 261 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 LAMTOR1Q6IAA8 161 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 SPATA25Q9BR10 227 aa13.14□□□□□ -0.31
SLC6A1-202ENST00000425938 C3orf84H3BNL1 204 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 HTR2BP41595 481 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 HAGHQ16775 308 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 SRD5A3Q9H8P0 318 aa13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
SLC6A1-202ENST00000425938 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 CEBPZOSA8MTT3 80 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 SCGB2A1O75556 95 aa13.12□□□□□ -0.31
SLC6A1-202ENST00000425938 OPRK1P41145 380 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms