RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ACTL6BO94805 426 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 TOMM20LQ6UXN7 152 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 C1orf159Q96HA4 380 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 ZGRF1Q86YA3 2104 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 THBS3P49746 956 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 HINT1P49773 126 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-205ENST00000425443 RPL15P61313 204 aaKnown RBP10.68□□□□□ -0.7
COL12A1-205ENST00000425443 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 ZNF292O60281 2723 aa10.68□□□□□ -0.7
COL12A1-205ENST00000425443 ARL14EPLP0DKL9 152 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 ACOT6Q3I5F7 207 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-205ENST00000425443 SFXN3Q9BWM7 321 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 SS18L2Q9UHA2 77 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 TIMP3P35625 211 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 RBMXL3Q8N7X1 1067 aaKnown RBP10.67□□□□□ -0.7
COL12A1-205ENST00000425443 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 GRIFINA4D1Z8 144 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 ANAPC16Q96DE5 110 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 SNRNP40Q96DI7 357 aaKnown RBP10.67□□□□□ -0.7
COL12A1-205ENST00000425443 CCL13Q99616 98 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 MS4A5Q9H3V2 200 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 ENY2Q9NPA8 101 aa10.67□□□□□ -0.7
COL12A1-205ENST00000425443 ABCA4P78363 2273 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 PRRG2O14669 202 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 TYMSP04818 313 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 CFHR2P36980 270 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 OR4S2Q8NH73 311 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 CCL8P80075 99 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 SPATA31B1PQ5VZV4 182 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 MGST2Q99735 147 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 GCM1Q9NP62 436 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 DSCAMO60469 2012 aa10.66□□□□□ -0.7
COL12A1-205ENST00000425443 SCO2A0A1W2PP80 73 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 CORTO00230 105 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 CD40P25942 277 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 LOXL3P58215 753 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 RAB31Q13636 194 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 ACY3Q96HD9 319 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 IFI27L2Q9H2X8 130 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 IGHV1-46P01743 117 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 CKS1BP61024 79 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 ZCCHC24Q8N2G6 241 aaKnown RBP10.65□□□□□ -0.7
COL12A1-205ENST00000425443 FAM57AQ8TBR7 257 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 TMEM18Q96B42 140 aa10.65□□□□□ -0.7
COL12A1-205ENST00000425443 NAV3Q8IVL0 2385 aa10.65□□□□□ -0.71
COL12A1-205ENST00000425443 KBTBD11-OT1A0A1B0GTJ5 212 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 F2RL2O00254 374 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 OR7C2O60412 319 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SPINK4O60575 86 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 VENTXO95231 258 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 OR10J1P30954 320 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SRP14P37108 136 aaKnown RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 KIR2DS2P43631 304 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 CNN1P51911 297 aaKnown RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 MOB3BQ86TA1 216 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 CISD2Q8N5K1 135 aaKnown RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 FAM216BQ8N7L0 139 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 RND1Q92730 232 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 YTHDF2Q9Y5A9 579 aaKnown RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 IGLV3-9A0A075B6K5 115 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 TMPRSS2O15393 492 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 FOXH1O75593 365 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 GATA2P23769 480 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 ATP5J2P56134 94 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 IMMP2LQ96T52 175 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 TP53TG3Q9ULZ0 132 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SAA2-SAA4A0A096LPE2 208 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 TM4SF5O14894 197 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 TOMM40O96008 361 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 LHBP01229 141 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SAA2P0DJI9 122 aaPredicted RBP10.64□□□□□ -0.71
COL12A1-205ENST00000425443 CT45A1Q5HYN5 189 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 C22orf34Q6ZV56 151 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 CT45A3Q8NHU0 189 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SLC45A2Q9UMX9 530 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 TRAPPC1Q9Y5R8 145 aa10.64□□□□□ -0.71
COL12A1-205ENST00000425443 SIVA1O15304 175 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 MMP23AO75900 390 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 MT-CO2P00403 227 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 ADMP35318 185 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 LINC00310P59036 64 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 TCF15Q12870 199 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 SGMS2Q8NHU3 365 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 GGTLC1Q9BX51 225 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 ELOVL5Q9NYP7 299 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 TCF19Q9Y242 345 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 TLN1Q9Y490 2541 aaKnown RBP10.63□□□□□ -0.71
COL12A1-205ENST00000425443 C16orf97H3BN30 126 aa10.63□□□□□ -0.71
COL12A1-205ENST00000425443 K7EN84 100 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms