RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OR2T8A6NH00 312 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 ST8SIA3O43173 380 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 B3GALNT1O75752 331 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 NXPH3O95157 252 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 RBMY1DP0C7P1 496 aaKnown RBP9.77□□□□□ -0.85
VRK3-203ENST00000424804 ETV6P41212 452 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 MFAP2P55001 183 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 ERHP84090 104 aaKnown RBP9.77□□□□□ -0.85
VRK3-203ENST00000424804 KLK9Q2XQG4 91 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 Q56UQ5 140 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 PLET1Q6UQ28 207 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 SELENOHQ8IZQ5 122 aaKnown RBP9.77□□□□□ -0.85
VRK3-203ENST00000424804 CADM3Q8N126 398 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 LHFPL5Q8TAF8 219 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 GLYATL2Q8WU03 294 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 RBPMSQ93062 196 aaKnown RBP9.77□□□□□ -0.85
VRK3-203ENST00000424804 HIPK2Q9H2X6 1198 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 ENY2Q9NPA8 101 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 KLK9Q9UKQ9 250 aa9.77□□□□□ -0.85
VRK3-203ENST00000424804 A0A0B4J293 547 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 CDS2O95674 445 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 CD7P09564 240 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 SNCAP37840 140 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 DEFB114Q30KQ6 69 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 CD300EQ496F6 205 aaPredicted RBP9.76□□□□□ -0.85
VRK3-203ENST00000424804 FAM106AQ4KMX7 169 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 LCN12Q6JVE5 192 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 OR2C3Q8N628 320 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 OR1L6Q8NGR2 347 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 OR2K2Q8NGT1 345 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 ZNF502Q8TBZ5 544 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 SRRQ9GZT4 340 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 PALMDQ9NP74 551 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
VRK3-203ENST00000424804 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 TGOLN2O43493 480 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 ANXA3P12429 323 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 VAMP1P23763 118 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 BAK1Q16611 211 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 OR1P1Q8NH06 330 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 VN1R17PQ8TDU5 208 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 SCARB1Q8WTV0 552 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 CACNG5Q9UF02 275 aa9.75□□□□□ -0.85
VRK3-203ENST00000424804 P0C879 139 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 CCR6P51684 374 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 TMEM187Q14656 261 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 Q6ZRM9 215 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 FAM219AQ8IW50 185 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 GPR146Q96CH1 333 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 NEURL2Q9BR09 285 aa9.74□□□□□ -0.85
VRK3-203ENST00000424804 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.74□□□□□ -0.85
VRK3-203ENST00000424804 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 IGHV3OR16-8A0A075B7F1 116 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 C2orf70A6NJV1 201 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 CEBPZOSA8MTT3 80 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 K7EIM0 57 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 MT-CO2P00403 227 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 FOLR2P14207 255 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 SUB1P53999 127 aaKnown RBP eCLIP9.73□□□□□ -0.85
VRK3-203ENST00000424804 GUCA2BQ16661 112 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 GTSCR1Q86UQ5 136 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 FAM110AQ9BQ89 295 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 TUBA4BQ9H853 241 aa9.73□□□□□ -0.85
VRK3-203ENST00000424804 HEYLQ9NQ87 328 aaPredicted RBP9.73□□□□□ -0.85
VRK3-203ENST00000424804 LGALS9O00182 355 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
VRK3-203ENST00000424804 SULT1A3P0DMM9 295 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 SULT1A4P0DMN0 295 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 MFAP4P55083 255 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 CD81P60033 236 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 SUPT4H1P63272 117 aaKnown RBP9.72□□□□□ -0.85
VRK3-203ENST00000424804 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 LGI3Q8N145 548 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 CENPSQ8N2Z9 138 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 GALNT14Q96FL9 552 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
VRK3-203ENST00000424804 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
VRK3-203ENST00000424804 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 TMEM56-RWDD3S4R434 201 aa9.72□□□□□ -0.85
VRK3-203ENST00000424804 DNAH10Q8IVF4 4471 aa9.71□□□□□ -0.85
VRK3-203ENST00000424804 CENPXA8MT69 81 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 NUPL2O15504 423 aaKnown RBP9.71□□□□□ -0.86
VRK3-203ENST00000424804 GNG7O60262 68 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 YIF1AO95070 293 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 CBLN1P23435 193 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 SPCS3P61009 180 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 SRPXP78539 464 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 RBMS2Q15434 407 aaKnown RBP9.71□□□□□ -0.86
VRK3-203ENST00000424804 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 UXS1Q8NBZ7 420 aa9.71□□□□□ -0.86
VRK3-203ENST00000424804 ZNF114Q8NC26 417 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms