RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 OR11H1Q8NG94 326 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 DPF1Q92782 380 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 EEF1AKMT3Q96AZ1 226 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 MISP3Q96FF7 219 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 DUX3Q96PT4 197 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 MAGT1Q9H0U3 335 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 U3KQ87 197 aa13.14□□□□□ -0.31
FOXN4-203ENST00000423960 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 WIPF1O43516 503 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
FOXN4-203ENST00000423960 PVRIGQ6DKI7 326 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 C11orf87Q6NUJ2 197 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 VN1R17PQ8TDU5 208 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
FOXN4-203ENST00000423960 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
FOXN4-203ENST00000423960 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
FOXN4-203ENST00000423960 ALG5Q9Y673 324 aa13.13□□□□□ -0.31
FOXN4-203ENST00000423960 TRBV7-1A0A0A6YYK4 115 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 WRBO00258 174 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 GOSR2O14653 212 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 SCGB1D2O95969 90 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 IFNA10P01566 189 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 IAPPP10997 89 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
FOXN4-203ENST00000423960 POLR2GP62487 172 aaKnown RBP eCLIP13.12□□□□□ -0.31
FOXN4-203ENST00000423960 ZNF616Q08AN1 781 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 FAM209BQ5JX69 171 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 ETV3LQ6ZN32 361 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 S4R3C0 116 aa13.12□□□□□ -0.31
FOXN4-203ENST00000423960 VWFP04275 2813 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 A0A087WW49 117 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.11□□□□□ -0.31
FOXN4-203ENST00000423960 IGHV3-21A0A0B4J1V1 117 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 LINC01619G3V211 115 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 I3L2K1 104 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 K7EIM0 57 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 CORTO00230 105 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 LY86O95711 162 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 MT-CO2P00403 227 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 NPY1RP25929 384 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 SCARB1Q8WTV0 552 aa13.11□□□□□ -0.31
FOXN4-203ENST00000423960 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
FOXN4-203ENST00000423960 SIX6O95475 246 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
FOXN4-203ENST00000423960 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
FOXN4-203ENST00000423960 CLEC19AQ6UXS0 136 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
FOXN4-203ENST00000423960 C21orf62Q9NYP8 219 aa13.1□□□□□ -0.31
FOXN4-203ENST00000423960 CMYA5Q8N3K9 4069 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 SSSCA1O60232 199 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 CLEC3BP05452 202 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 IL15RAQ13261 267 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 FHL3Q13643 280 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 TMEM170AQ8WVE7 144 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 CCDC140Q96MF4 163 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 MGAT4CQ9UBM8 478 aa13.09□□□□□ -0.31
FOXN4-203ENST00000423960 IFNA4P05014 189 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 ZP3P21754 424 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 OPRK1P41145 380 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 MFAP4P55083 255 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 RAB11AP62491 216 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
FOXN4-203ENST00000423960 DEFA6Q01524 100 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 WFDC9Q8NEX5 89 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 SMIM8Q96KF7 97 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 MED28Q9H204 178 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
FOXN4-203ENST00000423960 RPS10-NUDT3A0A1W2PQS6 291 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 C15orf62A8K5M9 175 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 K7EPK0 472 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 BMPR1BO00238 502 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 IGHV3-48P01763 117 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 ARL3P36405 182 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 SLURP1P55000 103 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 MLANAQ16655 118 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 Q56UQ5 140 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 TXN2Q99757 166 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 NMES1Q9C002 83 aa13.07□□□□□ -0.32
FOXN4-203ENST00000423960 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 RCL1Q9Y2P8 373 aaKnown RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 STRAPQ9Y3F4 350 aaKnown RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 LSM5Q9Y4Y9 91 aaKnown RBP13.07□□□□□ -0.32
FOXN4-203ENST00000423960 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms