RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ZNF562Q6V9R5 426 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TMEM17Q86X19 198 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 NDUFA11Q86Y39 141 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 STPG2Q8N412 459 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TCTEX1D1Q8N7M0 179 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TMEM229BQ8NBD8 167 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CD300LFQ8TDQ1 290 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 C5orf30Q96GV9 206 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 SOSTQ9BQB4 213 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF2Q9BSG1 426 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 SLIRPQ9GZT3 109 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FBXL15Q9H469 300 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TAS2R8Q9NYW2 309 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 METTL1Q9UBP6 276 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 KLK11Q9UBX7 282 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 NUBP2Q9Y5Y2 271 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 MXRA5Q9NR99 2828 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 IGHV7-81A0A0B4J1V7 117 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TRAV41A0A0B4J266 112 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FABP12A6NFH5 140 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 GPR31O00270 319 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FCN1O00602 326 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 GSTZ1O43708 216 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CREBL2O60519 120 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 PGLYRP1O75594 196 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CRYZL1O95825 349 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 HRASP01112 189 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 IGLV2-23P01705 113 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 IGHG4P01861 327 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CD74P04233 296 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 IGKV1-16P04430 117 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 VDAC1P21796 283 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CNTFRP26992 372 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 S100GP29377 79 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 GNRHRP30968 328 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 S100A5P33763 92 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 HRH1P35367 487 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TAS2R19P59542 299 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FXYD4P59646 89 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 UBE2KP61086 200 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 RPL30P62888 115 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 EIF4EBP1Q13541 118 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 IL18Q14116 193 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FXYD3Q14802 87 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 PLGLAQ15195 96 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 RNASE10Q5GAN6 216 aaKnown RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TCTEX1D4Q5JR98 221 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 KCTD9Q7L273 389 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 PPP1R27Q86WC6 154 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 LAX1Q8IWV1 398 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 CMTM1Q8IZ96 169 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 ARRDC1Q8N5I2 433 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 LRTM2Q8N967 370 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 OR4F17Q8NGA8 305 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 OR10G8Q8NGN5 311 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 OR4S2Q8NH73 311 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 VSTM2AQ8TAG5 236 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 SMIM4Q8WVI0 70 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TCTEX1D2Q8WW35 142 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 NOL4LQ96MY1 436 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 OR4F4Q96R69 305 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 HSPB9Q9BQS6 159 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 DCUN1D5Q9BTE7 237 aa1.91□□□□□ -2.1
VPS13A-208ENST00000423463 C6orf62Q9GZU0 229 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FAM212BQ9NTI7 297 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 TSSC4Q9Y5U2 329 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-208ENST00000423463 FBN3Q75N90 2809 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 SRRM4A7MD48 611 aaKnown RBP1.9□□□□□ -2.1
VPS13A-208ENST00000423463 DISC1C4P0D8 188 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 CNIH1O95406 144 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 BRI3O95415 125 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 RAB3DO95716 219 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 HPRT1P00492 218 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 CD3DP04234 171 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 F2RP25116 425 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 CD40LGP29965 261 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 MAS1LP35410 378 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 MYCNOSP40205 109 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 ETV6P41212 452 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 RND3P61587 244 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 RPL23AP62750 156 aaKnown RBP1.9□□□□□ -2.1
VPS13A-208ENST00000423463 MEF2DQ14814 521 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 POU2AF1Q16633 256 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 PRSS8Q16651 343 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 NSUN5P1Q3KNT7 163 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 AKIRIN2Q53H80 203 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 AADACL3Q5VUY0 350 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 STEAP1BQ6NZ63 245 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 UNQ5815/PRO19632Q6UWF5 114 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 C10orf99Q6UWK7 81 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 ZNF818PQ6ZRF7 136 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 SLC38A6Q8IZM9 456 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 SPAG16Q8N0X2 631 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 MINDY2Q8NBR6 621 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 WFDC9Q8NEX5 89 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 OR4A5Q8NH83 315 aa1.9□□□□□ -2.1
VPS13A-208ENST00000423463 TERB2Q8NHR7 220 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms