RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 TMEM42Q69YG0 159 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 NPIPB3Q92617 1050 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 VENTXO95231 258 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 SSX8Q7RTT4 187 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 C14orf144Q96I85 54 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
SHISA9-201ENST00000423335 PLSCR4Q9NRQ2 329 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 TMEM106BQ9NUM4 274 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 SERF1AO75920 110 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 ZNF497Q6ZNH5 498 aa12.55□□□□□ -0.4
SHISA9-201ENST00000423335 SEBOXQ9HB31 216 aaPredicted RBP12.55□□□□□ -0.4
SHISA9-201ENST00000423335 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
SHISA9-201ENST00000423335 ZNF503-AS2A6NEH8 195 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 JOSD1Q15040 202 aaPredicted RBP12.54□□□□□ -0.4
SHISA9-201ENST00000423335 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 OR4F17Q8NGA8 305 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 OCC1Q8TAD7 63 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 MBD3L1Q8WWY6 194 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 FAM90A2PQ658T7 463 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 PCSK4Q6UW60 755 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 COL4A4P53420 1690 aaPredicted RBP12.54□□□□□ -0.4
SHISA9-201ENST00000423335 TRBV24-1A0A075B6N3 115 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 OR2J3O76001 311 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
SHISA9-201ENST00000423335 RPL8P62917 257 aaKnown RBP12.54□□□□□ -0.4
SHISA9-201ENST00000423335 LCN2P80188 198 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
SHISA9-201ENST00000423335 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TMEM131Q92545 1883 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 CD24P25063 80 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 IL15RAQ13261 267 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 C1orf162Q8NEQ5 155 aaPredicted RBP12.53□□□□□ -0.4
SHISA9-201ENST00000423335 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
SHISA9-201ENST00000423335 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 B9A039 149 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 IGHG3P01860 377 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 OR9G9P0C7N8 305 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TAS2R60P59551 318 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TXNDC17Q9BRA2 123 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 C2CD3Q4AC94 2353 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 LOC389332A0A1B0GUA5 103 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 MOSP00540 346 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TIMP3P35625 211 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 C10orf91Q5T1B1 145 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TBL2Q9Y4P3 447 aaKnown RBP12.53□□□□□ -0.4
SHISA9-201ENST00000423335 TM4SF5O14894 197 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 CA1P00915 261 aaPredicted RBP12.52□□□□□ -0.4
SHISA9-201ENST00000423335 ADMP35318 185 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 OR4A47Q6IF82 309 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 ERASQ7Z444 233 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.4
SHISA9-201ENST00000423335 MED12LQ86YW9 2145 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 F2RL2O00254 374 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 SMAD7O15105 426 aaKnown RBP12.52□□□□□ -0.41
SHISA9-201ENST00000423335 PGLYRP4Q96LB8 373 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 MT-ND6P03923 174 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 NRN1LQ496H8 165 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 COX19Q49B96 90 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
SHISA9-201ENST00000423335 TNCP24821 2201 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 IGHV3-35A0A0C4DH35 117 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 HLA-DQA1P01909 254 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 CD99P14209 185 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 ANAPC10Q9UM13 185 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 CEACAM3P40198 252 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 TFPI2P48307 235 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 PNKDQ8N490 385 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 NEU1Q99519 415 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 CEP192Q8TEP8 1941 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 ISLRO14498 428 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 PRB1P04280 392 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 GSX1Q9H4S2 264 aaPredicted RBP12.51□□□□□ -0.41
SHISA9-201ENST00000423335 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
SHISA9-201ENST00000423335 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
SHISA9-201ENST00000423335 PAX9P55771 341 aa12.5□□□□□ -0.41
SHISA9-201ENST00000423335 LY6EQ16553 131 aa12.5□□□□□ -0.41
SHISA9-201ENST00000423335 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
SHISA9-201ENST00000423335 RASL11BQ9BPW5 248 aa12.5□□□□□ -0.41
SHISA9-201ENST00000423335 FN1P02751 2386 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms