RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TMEM14BQ9NUH8 114 aa11.46□□□□□ -0.57
USB1-202ENST00000423271 TBC1D24Q9ULP9 559 aa11.46□□□□□ -0.57
USB1-202ENST00000423271 TMEM56-RWDD3S4R434 201 aa11.46□□□□□ -0.57
USB1-202ENST00000423271 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 CD7P09564 240 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 TRAPPC2P0DI81 140 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 TRAPPC2BP0DI82 140 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 ANXA3P12429 323 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 VAMP1P23763 118 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 IFITM3Q01628 133 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 PPP1R1AQ13522 171 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 CASC10Q5T4H9 136 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
USB1-202ENST00000423271 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
USB1-202ENST00000423271 WDR89Q96FK6 387 aaPredicted RBP11.45□□□□□ -0.58
USB1-202ENST00000423271 CITED4Q96RK1 184 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 LYSTQ99698 3801 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
USB1-202ENST00000423271 HINT2Q9BX68 163 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 TUBA4BQ9H853 241 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 NDUFA4L2Q9NRX3 87 aa11.45□□□□□ -0.58
USB1-202ENST00000423271 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
USB1-202ENST00000423271 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 A0A0B4J293 547 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 ZNF320A2RRD8 509 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 SFT2D2O95562 160 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 CLEC3BP05452 202 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 GPR183P32249 361 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 GUCA2BQ16661 112 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 UNQ9165/PRO28630Q6UXU0 137 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 SLC35G3Q8N808 338 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 OR5B3Q8NH48 314 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 ZNF502Q8TBZ5 544 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 CXorf58Q96LI9 332 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 SPATA25Q9BR10 227 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 FKBP11Q9NYL4 201 aa11.44□□□□□ -0.58
USB1-202ENST00000423271 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 A8MWP6 167 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 OR13C7P0DN81 318 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 ANXA7P20073 488 aaKnown RBP11.43□□□□□ -0.58
USB1-202ENST00000423271 CBLN1P23435 193 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 ASAH1Q13510 395 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 THOC7Q6I9Y2 204 aaKnown RBP11.43□□□□□ -0.58
USB1-202ENST00000423271 Q6ZRM9 215 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 LGI3Q8N145 548 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 DEFB125Q8N687 156 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 RETNQ9HD89 108 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 TECRQ9NZ01 308 aaKnown RBP11.43□□□□□ -0.58
USB1-202ENST00000423271 MLXQ9UH92 298 aa11.43□□□□□ -0.58
USB1-202ENST00000423271 TCRBP04435 133 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 MFAP2P55001 183 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 UBE2MP61081 183 aaKnown RBP11.42□□□□□ -0.58
USB1-202ENST00000423271 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
USB1-202ENST00000423271 SRPXP78539 464 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 FAM106AQ4KMX7 169 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 SPINK9Q5DT21 86 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
USB1-202ENST00000423271 LYZL2Q7Z4W2 148 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 TMEM61Q8N0U2 210 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 LSM10Q969L4 123 aaKnown RBP11.42□□□□□ -0.58
USB1-202ENST00000423271 C20orf85Q9H1P6 137 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 TENM2Q9NT68 2774 aa11.42□□□□□ -0.58
USB1-202ENST00000423271 HYDINQ4G0P3 5121 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 IGHV3-21A0A0B4J1V1 117 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 C9orf170A2RU37 121 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 ST8SIA3O43173 380 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 LYL1P12980 280 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 PRCDQ00LT1 54 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 SLC25A24Q6NUK1 477 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 MZT2BQ6NZ67 158 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 BTNL8Q6UX41 500 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 SRD5A3Q9H8P0 318 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 THYN1Q9P016 225 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
USB1-202ENST00000423271 TRAV6A0A075B6T7 132 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 FAM240BA0A1B0GVZ2 78 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 RBMY1BA6NDE4 496 aaKnown RBP11.4□□□□□ -0.58
USB1-202ENST00000423271 RBMY1EA6NEQ0 496 aaKnown RBP11.4□□□□□ -0.58
USB1-202ENST00000423271 TGOLN2O43493 480 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 IFNA17P01571 189 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 OR4E1P0C645 316 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 RBMY1DP0C7P1 496 aaKnown RBP11.4□□□□□ -0.58
USB1-202ENST00000423271 NMSQ5H8A3 153 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 PLET1Q6UQ28 207 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
USB1-202ENST00000423271 VN1R17PQ8TDU5 208 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 FAM110AQ9BQ89 295 aa11.4□□□□□ -0.58
USB1-202ENST00000423271 F11RQ9Y624 299 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms