RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 ZNF71Q9NQZ8 489 aaPredicted RBP9□□□□□ -0.97
LIMS1-207ENST00000422797 SERTAD4Q9NUC0 356 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 RPUSD1Q9UJJ7 312 aaKnown RBP9□□□□□ -0.97
LIMS1-207ENST00000422797 SLC25A15Q9Y619 301 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 USF3Q68DE3 2245 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 TEX50A0A1B0GTY4 177 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 hADV38S2A0JD32 116 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 TFF1P04155 84 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 PMCHP20382 165 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 CHRNB4P30926 498 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF83P51522 516 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 CT83Q5H943 113 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 TIMM23BQ5SRD1 257 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 VWA1Q6PCB0 445 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 IGFL2Q6UWQ7 119 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 MOGAT3Q86VF5 341 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 C9orf106Q8NAJ2 232 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 TSKUQ8WUA8 353 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 FAM103A1Q9BTL3 118 aaKnown RBP9□□□□□ -0.97
LIMS1-207ENST00000422797 RNASE7Q9H1E1 156 aaKnown RBP9□□□□□ -0.97
LIMS1-207ENST00000422797 GAL3ST2Q9H3Q3 398 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF430Q9H8G1 570 aaPredicted RBP9□□□□□ -0.97
LIMS1-207ENST00000422797 C1RLQ9NZP8 487 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 LAMTOR2Q9Y2Q5 125 aa9□□□□□ -0.97
LIMS1-207ENST00000422797 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 NKX6-3A6NJ46 265 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 F2Z2F3 143 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 PEX7O00628 323 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 COX7A2P2O60397 106 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 HYPMO75409 117 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 HSBP1O75506 76 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 C3orf79P0CE67 100 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 CD59P13987 128 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 MEF2CQ06413 473 aaPredicted RBP8.99□□□□□ -0.97
LIMS1-207ENST00000422797 TBR1Q16650 682 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 Q6ZN92 141 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF833PQ6ZTB9 187 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 NIT1Q86X76 327 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 ZNRF1Q8ND25 227 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 C18orf32Q8TCD1 76 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 ARRDC1-AS1Q9H2J1 176 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 FZR1Q9UM11 496 aa8.99□□□□□ -0.97
LIMS1-207ENST00000422797 AMMECR1Q9Y4X0 333 aaPredicted RBP8.99□□□□□ -0.97
LIMS1-207ENST00000422797 TRAV9-2A0A087WT02 112 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 PSMB11A5LHX3 300 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 NHLH1Q02575 133 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 TMEM177Q53S58 311 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 ETFRF1Q6IPR1 90 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 MRPL54Q6P161 138 aaKnown RBP8.98□□□□□ -0.97
LIMS1-207ENST00000422797 C8orf31Q8N9H6 132 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 THAP8Q8NA92 274 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 PAXXQ9BUH6 204 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 NDUFA4L2Q9NRX3 87 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 LINC00312Q9Y6C7 94 aa8.98□□□□□ -0.97
LIMS1-207ENST00000422797 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 IGHV3OR15-7A0A075B7D8 119 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 MBD3L4A6NDZ8 208 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-207ENST00000422797 MBD3L3A6NE82 208 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-207ENST00000422797 MBD3L5A6NJ08 208 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-207ENST00000422797 NPSP0C0P6 89 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 CD33P20138 364 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 TCL1AP56279 114 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 RPL8P62917 257 aaKnown RBP8.97□□□□□ -0.97
LIMS1-207ENST00000422797 FXYD3Q14802 87 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 BATFQ16520 125 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 HES3Q5TGS1 186 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 C10orf113Q5VZT2 155 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF788Q6ZQV5 615 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 C11orf42Q8N5U0 333 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 OR8B3Q8NGG8 313 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 MBD3L2Q8NHZ7 208 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-207ENST00000422797 ITLN1Q8WWA0 313 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 PLPPR2Q96GM1 343 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 OR8B2Q96RD0 313 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF492Q9P255 531 aa8.97□□□□□ -0.97
LIMS1-207ENST00000422797 IGKV1OR2-108A0A075B7D4 117 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 IGHV2-26A0A0B4J1V2 119 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 LOC100996750A0A140TA64 210 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 FAM231BA6NCW3 169 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 SIAH2O43255 324 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 SAA1P0DJI8 122 aaPredicted RBP8.96□□□□□ -0.97
LIMS1-207ENST00000422797 REG1BP48304 166 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 MFAP2P55001 183 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 UBE2G1P62253 170 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 PLA2G2CQ5R387 149 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 TEX36Q5VZQ5 186 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 ZNF329Q86UD4 541 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 PDPNQ86YL7 162 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 OR10X1Q8NGY0 326 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 C22orf15Q8WYQ4 148 aa8.96□□□□□ -0.97
LIMS1-207ENST00000422797 CHCHD1Q96BP2 118 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms