RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 NDPQ00604 133 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 MMDQ15546 238 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 LY6EQ16553 131 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 PRSS8Q16651 343 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 VWC2Q2TAL6 325 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 Q8N9W7 124 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 OR2T10Q8NGZ9 312 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 NKX6-2Q9C056 277 aaPredicted RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 EIF5A2Q9GZV4 153 aaKnown RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 RPRMQ9NS64 109 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 METTL1Q9UBP6 276 aaKnown RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 FOXA2Q9Y261 457 aaPredicted RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 TEX50A0A1B0GTY4 177 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 RRHO14718 337 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 TSPAN9O75954 239 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 FBP1P09467 338 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 TMEM11P17152 192 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 LGALS7P47929 136 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 HOXA1P49639 335 aaPredicted RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 ELLP55199 621 aaPredicted RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 SERF2P84101 59 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 PEA15Q15121 130 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 C19orf35Q6ZS72 473 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 OR10W1Q8NGF6 305 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 TMEM170AQ8WVE7 144 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 PBDC1Q9BVG4 233 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 HIPK2Q9H2X6 1198 aa7.11□□□□□ -1.27
HPS4-204ENST00000422379 HEYLQ9NQ87 328 aaPredicted RBP7.11□□□□□ -1.27
HPS4-204ENST00000422379 A6NDX4 124 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 BTBD17A6NE02 478 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 LINC01548A6NM66 108 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
HPS4-204ENST00000422379 NBR2O15453 112 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
HPS4-204ENST00000422379 IFNA10P01566 189 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 FAM106CPP0CH98 169 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 FGF7P21781 194 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
HPS4-204ENST00000422379 ZNF726P1Q15940 193 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 C5orf64Q2M2E5 130 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 FAM122CQ6P4D5 195 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 Q6ZS46 218 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 SSX7Q7RTT5 188 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 CENPVQ7Z7K6 275 aaPredicted RBP7.1□□□□□ -1.27
HPS4-204ENST00000422379 PPP1R27Q86WC6 154 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 SFT2D1Q8WV19 159 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 HSPB9Q9BQS6 159 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 KIAA1456Q9P272 454 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 TIMM9Q9Y5J7 89 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 OR51B2Q9Y5P1 312 aa7.1□□□□□ -1.27
HPS4-204ENST00000422379 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 NUPL2O15504 423 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 CA2P00918 260 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 HBE1P02100 147 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 APELAP0DMC3 54 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 MDKP21741 143 aaPredicted RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 BRS3P32247 399 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 IER3P46695 156 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 NPBWR1P48145 328 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 RPL8P62917 257 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 VMA21Q3ZAQ7 101 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 TMEM41BQ5BJD5 291 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 ACSM6Q6P461 480 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RCC1LQ96I51 464 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 DUX5Q96PT3 197 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RNF5Q99942 180 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RARRES2Q99969 163 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 ENY2Q9NPA8 101 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 NDUFA4L2Q9NRX3 87 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 TNFRSF19Q9NS68 423 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 FKBP11Q9NYL4 201 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 PRNDQ9UKY0 176 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RBFOX3A6NFN3 312 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 NCBP2LA6PVI3 153 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 EGR2P11161 476 aaPredicted RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 CD99P14209 185 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 COMPP49747 757 aaPredicted RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 BPIFB3P59826 476 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RAB2AP61019 212 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 GNB1P62873 340 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 Q6YL49 198 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 SIGLECL1Q8N7X8 197 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 C5orf56Q8N8D9 126 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 RBM14Q96PK6 669 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 FAM103A1Q9BTL3 118 aaKnown RBP7.09□□□□□ -1.27
HPS4-204ENST00000422379 NPCDR1Q9BY65 106 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 WDR83OSQ9Y284 106 aa7.09□□□□□ -1.27
HPS4-204ENST00000422379 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms