RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 MED28Q9H204 178 aa11.72□□□□□ -0.53
CDRT15-201ENST00000420162 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 SCGB1D2O95969 90 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 MBPP02686 304 aaPredicted RBP11.71□□□□□ -0.53
CDRT15-201ENST00000420162 NPY1RP25929 384 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 MYCNOSP40205 109 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 POLR2GP62487 172 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDRT15-201ENST00000420162 IL15RAQ13261 267 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
CDRT15-201ENST00000420162 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 OR5B12Q96R08 314 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 NMES1Q9C002 83 aa11.71□□□□□ -0.53
CDRT15-201ENST00000420162 RANGRFQ9HD47 186 aaPredicted RBP11.71□□□□□ -0.53
CDRT15-201ENST00000420162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.7□□□□□ -0.54
CDRT15-201ENST00000420162 CCL24O00175 119 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 SIX6O95475 246 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 HSPB1P04792 205 aaKnown RBP11.7□□□□□ -0.54
CDRT15-201ENST00000420162 IAPPP10997 89 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 TAS2R30P59541 319 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 DEFA5Q01523 94 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 RNASEH2CQ8TDP1 164 aaKnown RBP11.7□□□□□ -0.54
CDRT15-201ENST00000420162 DPF1Q92782 380 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 SMIM8Q96KF7 97 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 MGAT4CQ9UBM8 478 aa11.7□□□□□ -0.54
CDRT15-201ENST00000420162 PEF1Q9UBV8 284 aaKnown RBP11.7□□□□□ -0.54
CDRT15-201ENST00000420162 I3L2K1 104 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 K7EIM0 57 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 SSSCA1O60232 199 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 H2BFSP57053 126 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 RAB11AP62491 216 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 ZNF616Q08AN1 781 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 SCARB1Q8WTV0 552 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 PINX1Q96BK5 328 aaKnown RBP11.69□□□□□ -0.54
CDRT15-201ENST00000420162 GAR1Q9NY12 217 aaKnown RBP11.69□□□□□ -0.54
CDRT15-201ENST00000420162 C21orf62Q9NYP8 219 aa11.69□□□□□ -0.54
CDRT15-201ENST00000420162 VWFP04275 2813 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 ANK2Q01484 3957 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 RPS10-NUDT3A0A1W2PQS6 291 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 ANKRD34BA5PLL1 514 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 MFSD2BA6NFX1 497 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 LINC01619G3V211 115 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 MT-CO2P00403 227 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 PF4P02776 101 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 IFNA4P05014 189 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 PVALBP20472 110 aaPredicted RBP11.68□□□□□ -0.54
CDRT15-201ENST00000420162 FHL3Q13643 280 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 DEFB136Q30KP8 78 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 TXN2Q99757 166 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
CDRT15-201ENST00000420162 RCL1Q9Y2P8 373 aaKnown RBP11.68□□□□□ -0.54
CDRT15-201ENST00000420162 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
CDRT15-201ENST00000420162 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 K7EPK0 472 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 L7N2F9 121 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 TSC22D2O75157 780 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 TSPAN15O95858 294 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 RLN2P04090 185 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 CLEC3BP05452 202 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 OR8U8P0C7N1 319 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 ZP3P21754 424 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
CDRT15-201ENST00000420162 OPRK1P41145 380 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 MFAP4P55083 255 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 S100A10P60903 97 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 RRAS2P62070 204 aaPredicted RBP11.67□□□□□ -0.54
CDRT15-201ENST00000420162 VAMP2P63027 116 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 PRR31Q5SQ13 230 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 C11orf87Q6NUJ2 197 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 ETV3LQ6ZN32 361 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 CCDC140Q96MF4 163 aa11.67□□□□□ -0.54
CDRT15-201ENST00000420162 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
CDRT15-201ENST00000420162 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 IGHV4OR15-8A0A075B7B6 117 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 A0A087WW49 117 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 TMEM50AO95807 157 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 IGHV3-23P01764 117 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 SLC25A4P12235 298 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 CXCL3P19876 107 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 GPX4P36969 197 aaPredicted RBP11.66□□□□□ -0.54
CDRT15-201ENST00000420162 NPBWR1P48145 328 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 PAX9P55771 341 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 RAB32Q13637 225 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 FCN2Q15485 313 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 SPSB3Q6PJ21 355 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 ASB13Q8WXK3 278 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 PAIP2BQ9ULR5 123 aaKnown RBP11.66□□□□□ -0.54
CDRT15-201ENST00000420162 S4R3C0 116 aa11.66□□□□□ -0.54
CDRT15-201ENST00000420162 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms