RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 CLEC2LP0C7M8 214 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 C4BPBP20851 252 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
NFE4-201ENST00000420058 CMTM3Q96MX0 182 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 CELA1Q9UNI1 258 aa10.26□□□□□ -0.77
NFE4-201ENST00000420058 RRP15Q9Y3B9 282 aaKnown RBP10.26□□□□□ -0.77
NFE4-201ENST00000420058 TRAV2A0A0B4J234 112 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 RLN1P04808 185 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 MIFP14174 115 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 ERVK-16P61578 105 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 PAFAH1B2P68402 229 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 PVRIGQ6DKI7 326 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 TPRA1Q86W33 373 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 POM121L12Q8N7R1 296 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 MISP3Q96FF7 219 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 PRNDQ9UKY0 176 aa10.25□□□□□ -0.77
NFE4-201ENST00000420058 A0A1B0GU03 582 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 M0R2N4 97 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 SNAPC5O75971 98 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 CD5P06127 495 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 RFX2P48378 723 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 ZNF114Q8NC26 417 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 DUSP18Q8NEJ0 188 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 MOB3AQ96BX8 217 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 TMEM56Q96MV1 263 aa10.24□□□□□ -0.77
NFE4-201ENST00000420058 MEIS3P1A6NDR6 274 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 K7EQG2 157 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
NFE4-201ENST00000420058 ST8SIA3O43173 380 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 AMBPP02760 352 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 SDC2P34741 201 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 UBE2UQ5VVX9 321 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 ZNF767PQ75MW2 155 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 STHQ8IWL8 128 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 SEC22AQ96IW7 307 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 RNF167Q9H6Y7 350 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 CLEC5AQ9NY25 188 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 FKBP11Q9NYL4 201 aa10.23□□□□□ -0.77
NFE4-201ENST00000420058 TMEM50AO95807 157 aa10.22□□□□□ -0.77
NFE4-201ENST00000420058 LGALS9BQ3B8N2 356 aa10.22□□□□□ -0.77
NFE4-201ENST00000420058 Q6ZR54 194 aa10.22□□□□□ -0.77
NFE4-201ENST00000420058 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
NFE4-201ENST00000420058 ANAPC10Q9UM13 185 aa10.22□□□□□ -0.77
NFE4-201ENST00000420058 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
NFE4-201ENST00000420058 DEFB131BA0A096LNP1 70 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 A0A0A6YYH2 397 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 A6NJ64 397 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 ANKRD65E5RJM6 399 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 GNG7O60262 68 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 SPP1P10451 314 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 SCAND1P57086 179 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 HERV-K104P61576 105 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 PRCDQ00LT1 54 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 TMEM41BQ5BJD5 291 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
NFE4-201ENST00000420058 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 DCANP1Q8TF63 244 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 PINX1Q96BK5 328 aaKnown RBP10.21□□□□□ -0.77
NFE4-201ENST00000420058 GINS3Q9BRX5 216 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 FXYD6Q9H0Q3 95 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 EHFQ9NZC4 300 aa10.21□□□□□ -0.77
NFE4-201ENST00000420058 MRPL36Q9P0J6 103 aaKnown RBP10.21□□□□□ -0.77
NFE4-201ENST00000420058 P0DMU3 169 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 FAM231AP0DMU4 169 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 FAM231CP0DMU5 169 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 NAT1P18440 290 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 CBX5P45973 191 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
NFE4-201ENST00000420058 RPL11P62913 178 aaKnown RBP10.2□□□□□ -0.78
NFE4-201ENST00000420058 MXD1Q05195 221 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 ZNF600Q6ZNG1 722 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 LYSMD2Q8IV50 215 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 SPARTQ8N0X7 666 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 BORCS5Q969J3 196 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 GRAMD2BQ96HH9 432 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 TSC22D3Q99576 134 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 RABAC1Q9UI14 185 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 TBC1D24Q9ULP9 559 aa10.2□□□□□ -0.78
NFE4-201ENST00000420058 GPR31O00270 319 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 PMP2P02689 132 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 EIF4EP06730 217 aaKnown RBP10.19□□□□□ -0.78
NFE4-201ENST00000420058 ZNF688P0C7X2 276 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 CRYBB3P26998 211 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 PPP5CP53041 499 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 MLANAQ16655 118 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 IDNKQ5T6J7 187 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 CNBD2Q96M20 576 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 DIABLOQ9NR28 239 aa10.19□□□□□ -0.78
NFE4-201ENST00000420058 FAM212BQ9NTI7 297 aaPredicted RBP10.19□□□□□ -0.78
NFE4-201ENST00000420058 CD74P04233 296 aa10.18□□□□□ -0.78
NFE4-201ENST00000420058 NPPCP23582 126 aa10.18□□□□□ -0.78
NFE4-201ENST00000420058 NPBWR1P48145 328 aa10.18□□□□□ -0.78
NFE4-201ENST00000420058 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
NFE4-201ENST00000420058 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms