RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 STXBP6Q8NFX7 210 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SSBP3Q9BWW4 388 aaPredicted RBP11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SEPSECSQ9HD40 501 aaKnown RBP11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SIGLEC9Q9Y336 463 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ADGRG4Q8IZF6 3080 aa11.73□□□□□ -0.53
HLA-DPA1-242ENST00000419277 MALRD1Q5VYJ5 2156 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 TCRBV4S1A1TA0A5B7 111 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SMIM6P0DI80 62 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 HTR1DP28221 377 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR10J1P30954 320 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 PPP1R27Q86WC6 154 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 NBEAQ8NFP9 2946 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 CRYGCP07315 174 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 C8orf88P0DMB2 117 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 MYOD1P15172 320 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 FAM3BP58499 235 aaPredicted RBP11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 ZFP82Q8N141 532 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR10W1Q8NGF6 305 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 OR51G1Q8NGK1 321 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
HLA-DPA1-242ENST00000419277 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.53
HLA-DPA1-242ENST00000419277 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PRTN3P24158 256 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 GNB1P62873 340 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 DIAPH2-AS1Q14236 149 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PSG5Q15238 335 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TMEM116Q8NCL8 245 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TPRP12270 2363 aaKnown RBP11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 LOC105371242A0A075B767 164 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ENSAO43768 121 aaKnown RBP11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TYMSP04818 313 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 GALR1P47211 349 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ATP5G3P48201 142 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 AKR1D1P51857 326 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SNRPEP62304 92 aaKnown RBP11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 KIAA0141Q14154 515 aaPredicted RBP11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TPTE2P1Q5T6R2 138 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 C16orf82Q7Z2V1 217 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TRGV9Q99603 122 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SLC25A33Q9BSK2 321 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PSMB11A5LHX3 300 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 A6NNC1 897 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NDUFB4O95168 129 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 S100A9P06702 114 aaKnown RBP11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PFN1P07737 140 aaKnown RBP11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 CXCL1P09341 107 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 DEFA4P12838 97 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 UBE2G2P60604 165 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MOB3BQ86TA1 216 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MDFIC2A0A1B0GVS7 189 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 C22orf46C9J442 243 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 FABP1P07148 127 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SOD3P08294 240 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 RPL19P84098 196 aaKnown RBP11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 FOXL1Q12952 345 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 CDSNQ15517 529 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TNXAQ16473 311 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ACY3Q96HD9 319 aa11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
HLA-DPA1-242ENST00000419277 ABCA4P78363 2273 aa11.68□□□□□ -0.54
HLA-DPA1-242ENST00000419277 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
HLA-DPA1-242ENST00000419277 COX7A2P2O60397 106 aa11.68□□□□□ -0.54
HLA-DPA1-242ENST00000419277 FABP9Q0Z7S8 132 aa11.68□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MRGPRG-AS1Q2M3A8 158 aa11.68□□□□□ -0.54
HLA-DPA1-242ENST00000419277 OR7C2O60412 319 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NPPCP23582 126 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 EFNA4P52798 201 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 PLP1P60201 277 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 NPBQ8NG41 125 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 SFRP2Q96HF1 295 aa11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
HLA-DPA1-242ENST00000419277 E7EUB6 86 aa11.66□□□□□ -0.54
HLA-DPA1-242ENST00000419277 EIF3GO75821 320 aaKnown RBP eCLIP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms