RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SAPCD1Q5SSQ6 148 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 RIPPLY2Q5TAB7 128 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TSPO2Q5TGU0 170 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PLCXD3Q63HM9 321 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CYB5R2Q6BCY4 276 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF880Q6PDB4 577 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 LCN15Q6UWW0 184 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM14EPQ6UXP3 125 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF705AQ6ZN79 300 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 Q6ZR54 194 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF818PQ6ZRF7 136 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM144Q7Z5S9 345 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 RABEPKQ7Z6M1 372 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ANKRD37Q7Z713 158 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 MKXQ8IYA7 352 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 GAPTQ8N292 157 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 LINC00612Q8N6U2 182 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZNF709Q8N972 641 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 FADS6Q8N9I5 356 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 WDR31Q8NA23 367 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 NFAM1Q8NET5 270 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR2M3Q8NG83 312 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR11L1Q8NGX0 322 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR5B3Q8NH48 314 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR1F12Q8NHA8 337 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR10J5Q8NHC4 309 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TYMSOSQ8TAI1 123 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CMTM2Q8TAZ6 248 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PLPPR1Q8TBJ4 325 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 OR5P3Q8WZ94 311 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 DNAJA3Q96EY1 480 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 KLHDC3Q9BQ90 382 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 HDHD3Q9BSH5 251 aaPredicted RBP2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM208Q9BTX3 173 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 VAMP8Q9BV40 100 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM147Q9BVK8 224 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PLA2G2FQ9BZM2 168 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ULBP2Q9BZM5 246 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 GAL3ST2Q9H3Q3 398 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 RBKSQ9H477 322 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ASCL3Q9NQ33 180 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM9BQ9NQ34 198 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 CBLN4Q9NTU7 201 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TMEM106BQ9NUM4 274 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PSENENQ9NZ42 101 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TAAR3PQ9P1P4 343 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 MMP17Q9ULZ9 603 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 FUT9Q9Y231 359 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ZFP30Q9Y2G7 519 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 TRAPPC1Q9Y5R8 145 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 PXMP4Q9Y6I8 212 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 LY96Q9Y6Y9 160 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 ARL2-SNX15V9GYD0 113 aa2.03□□□□□ -2.08
VPS41-206ENST00000418457 KMT2EQ8IZD2 1858 aa2.03□□□□□ -2.09
VPS41-206ENST00000418457 USP34Q70CQ2 3546 aa2.03□□□□□ -2.09
VPS41-206ENST00000418457 MYO15AQ9UKN7 3530 aa2.03□□□□□ -2.09
VPS41-206ENST00000418457 TNRC6AQ8NDV7 1962 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-27A0A075B6S5 117 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1-12A0A0C4DH73 117 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TRBV11-1A0A0K0K1C0 115 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR5B21A6NL26 309 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 C9JCJ5 164 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 HSBP1L1C9JCN9 74 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 C11orf94C9JXX5 98 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TRAPPC2LH3BP13 241 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 K7EP13 123 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ANGPTL7O43827 346 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 EFNA2O43921 213 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 TMEM50AO95807 157 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 IGKV1D-12P01611 117 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR4A8P0C604 315 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 OR5G3P0C626 314 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 CRISP2P16562 243 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 GABRG2P18507 467 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 GZMHP20718 246 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 IL3RAP26951 378 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 G0S2P27469 103 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 CD1BP29016 333 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 BRS3P32247 399 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 BMI1P35226 326 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 PTGDSP41222 190 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RPL29P47914 159 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 CDC34P49427 236 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 GFERP55789 205 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 DSCR4P56555 118 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 KLF3P57682 345 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 RPS20P60866 119 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 ERVS71-1P61550 626 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 GNB2P62879 340 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 MRPS11P82912 194 aaKnown RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 TMEM267Q0VDI3 215 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 Q0VG73 95 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 CATR1Q13166 79 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 C1orf61Q13536 156 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 ZNF726P1Q15940 193 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 PMCHL1Q16048 86 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 C17orf58Q2M2W7 97 aa2.02□□□□□ -2.09
VPS41-206ENST00000418457 RSPO1Q2MKA7 263 aaPredicted RBP2.02□□□□□ -2.09
VPS41-206ENST00000418457 CEACAM21Q3KPI0 293 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms