RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PVRIGQ6DKI7 326 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 LGI3Q8N145 548 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 CENPSQ8N2Z9 138 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 OR1P1Q8NH06 330 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 RNASE11Q8TAA1 199 aaKnown RBP8.04□□□□□ -1.12
RFC1-203ENST00000418436 ZNF502Q8TBZ5 544 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 EEF1AKMT3Q96AZ1 226 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 PLEKHA3Q9HB20 300 aa8.04□□□□□ -1.12
RFC1-203ENST00000418436 AURKAIP1Q9NWT8 199 aaPredicted RBP8.04□□□□□ -1.12
RFC1-203ENST00000418436 PIGBOS1A0A0B4J2F0 54 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 DUXBA0A1W2PPF3 345 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 K7EIM0 57 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 LYRM1O43325 122 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 SFT2D2O95562 160 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 IFNA17P01571 189 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 SPCS3P61009 180 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
RFC1-203ENST00000418436 PPP1R1AQ13522 171 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 RPEL1Q2QD12 228 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 ANKRD55Q3KP44 614 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 SPINK9Q5DT21 86 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 CLEC19AQ6UXS0 136 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 IL34Q6ZMJ4 242 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 LYZL2Q7Z4W2 148 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 PDCD10Q9BUL8 212 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 ZMAT5Q9UDW3 170 aaKnown RBP8.03□□□□□ -1.12
RFC1-203ENST00000418436 CACNG5Q9UF02 275 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 FLVCR2Q9UPI3 526 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 S4R3C0 116 aa8.03□□□□□ -1.12
RFC1-203ENST00000418436 GGCTO75223 188 aaKnown RBP8.02□□□□□ -1.13
RFC1-203ENST00000418436 IGHV3-23P01764 117 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
RFC1-203ENST00000418436 CLEC3BP05452 202 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 SULT1A3P0DMM9 295 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 SULT1A4P0DMN0 295 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 VAMP1P23763 118 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 SYNJ2BPP57105 145 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 ZNF846Q147U1 533 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 TATDN3Q17R31 274 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 GPHB5Q86YW7 130 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 OR9G4Q8NGQ1 327 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 SCARB1Q8WTV0 552 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 ELOVL1Q9BW60 279 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 SIGLEC8Q9NYZ4 499 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 CACFD1Q9UGQ2 172 aa8.02□□□□□ -1.13
RFC1-203ENST00000418436 A0A1B0GU03 582 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 C9orf170A2RU37 121 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 I3L2K1 104 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 LGALS9O00182 355 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 PITX3O75364 302 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 SAP30O75446 220 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 OR2C1O95371 312 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
RFC1-203ENST00000418436 OR4E1P0C645 316 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 RNASE2P10153 161 aaKnown RBP8.01□□□□□ -1.13
RFC1-203ENST00000418436 SLC25A6P12236 298 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 FCGR2BP31994 310 aaPredicted RBP8.01□□□□□ -1.13
RFC1-203ENST00000418436 ARL3P36405 182 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 SMCO1Q147U7 214 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 OR4C12Q96R67 309 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 WDR12Q9GZL7 423 aaKnown RBP8.01□□□□□ -1.13
RFC1-203ENST00000418436 HSPB7Q9UBY9 170 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 TMED3Q9Y3Q3 217 aa8.01□□□□□ -1.13
RFC1-203ENST00000418436 PRKDCP78527 4128 aaKnown RBP8□□□□□ -1.13
RFC1-203ENST00000418436 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
RFC1-203ENST00000418436 TGOLN2O43493 480 aa8□□□□□ -1.13
RFC1-203ENST00000418436 UPK1BO75841 260 aa8□□□□□ -1.13
RFC1-203ENST00000418436 IGLV1-51P01701 117 aa8□□□□□ -1.13
RFC1-203ENST00000418436 TCRBP04435 133 aa8□□□□□ -1.13
RFC1-203ENST00000418436 CSN3P07498 182 aa8□□□□□ -1.13
RFC1-203ENST00000418436 ANXA7P20073 488 aaKnown RBP8□□□□□ -1.13
RFC1-203ENST00000418436 GPR183P32249 361 aa8□□□□□ -1.13
RFC1-203ENST00000418436 SNCAP37840 140 aa8□□□□□ -1.13
RFC1-203ENST00000418436 HOXA1P49639 335 aaPredicted RBP8□□□□□ -1.13
RFC1-203ENST00000418436 SUB1P53999 127 aaKnown RBP eCLIP8□□□□□ -1.13
RFC1-203ENST00000418436 DHRS2Q13268 280 aa8□□□□□ -1.13
RFC1-203ENST00000418436 LYG2Q86SG7 212 aa8□□□□□ -1.13
RFC1-203ENST00000418436 TXN2Q99757 166 aa8□□□□□ -1.13
RFC1-203ENST00000418436 ENY2Q9NPA8 101 aa8□□□□□ -1.13
RFC1-203ENST00000418436 C21orf62Q9NYP8 219 aa8□□□□□ -1.13
RFC1-203ENST00000418436 PEMTQ9UBM1 199 aa8□□□□□ -1.13
RFC1-203ENST00000418436 TBC1D24Q9ULP9 559 aa8□□□□□ -1.13
RFC1-203ENST00000418436 IGHV3-21A0A0B4J1V1 117 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 K7EIL1 84 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 CORTO00230 105 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 MT-CO2P00403 227 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 HTR2BP41595 481 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 IFITM3Q01628 133 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 TNFRSF9Q07011 255 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 ASAH1Q13510 395 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 C2orf83Q53S99 150 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 SPSB3Q6PJ21 355 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 PLET1Q6UQ28 207 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 ADAMTSL5Q6ZMM2 481 aa7.99□□□□□ -1.13
RFC1-203ENST00000418436 BSCL2Q96G97 398 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms