RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 C19orf35Q6ZS72 473 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 LCNL1Q6ZST4 164 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 STX12Q86Y82 276 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 UBAC2Q8NBM4 344 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 ZNF114Q8NC26 417 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 NECAP1Q8NC96 275 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 WFDC12Q8WWY7 111 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 DCUN1D4Q92564 292 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 EEF1AKMT3Q96AZ1 226 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 USMG5Q96IX5 58 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 SLC35E1Q96K37 410 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 CXorf58Q96LI9 332 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 CUBNO60494 3623 aa6.62□□□□□ -1.35
TRIM48-201ENST00000417545 TNCP24821 2201 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 IGHV3-21A0A0B4J1V1 117 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 SMCO3A2RU48 225 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 E5RGE8 158 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 INS-IGF2F8WCM5 200 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 SOX15O60248 233 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 TSC22D2O75157 780 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 CCNKO75909 580 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 IGHV3-11P01762 117 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 RNASE2P10153 161 aaKnown RBP6.61□□□□□ -1.35
TRIM48-201ENST00000417545 PSMB8P28062 276 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 ATP5IP56385 69 aaPredicted RBP6.61□□□□□ -1.35
TRIM48-201ENST00000417545 TAS2R30P59541 319 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 CFHR3Q02985 330 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 C15orf32Q32M92 178 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 C2orf83Q53S99 150 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 Q56UQ5 140 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 ACSM6Q6P461 480 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 ETV3LQ6ZN32 361 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 AKAP14Q86UN6 197 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 LILRB2Q8N423 598 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 OR2T35Q8NGX2 323 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 DPF1Q92782 380 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 SMIM8Q96KF7 97 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 OR5B12Q96R08 314 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 CITED2Q99967 270 aaPredicted RBP6.61□□□□□ -1.35
TRIM48-201ENST00000417545 SLC25A31Q9H0C2 315 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 GNB4Q9HAV0 340 aa6.61□□□□□ -1.35
TRIM48-201ENST00000417545 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 FXYD6-FXYD2A0A087WZ82 144 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 ANKRD34BA5PLL1 514 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 DEDDO75618 318 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 MPC2O95563 127 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 MT-CO2P00403 227 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 PF4P02776 101 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 HBG1P69891 147 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 HBG2P69892 147 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 FAM209BQ5JX69 171 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 PRSS54Q6PEW0 395 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 SHISA2Q6UWI4 295 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 RNASEH2CQ8TDP1 164 aaKnown RBP6.6□□□□□ -1.35
TRIM48-201ENST00000417545 UBE2E2Q96LR5 201 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 GAR1Q9NY12 217 aaKnown RBP6.6□□□□□ -1.35
TRIM48-201ENST00000417545 MBD2Q9UBB5 411 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 S4R3C0 116 aa6.6□□□□□ -1.35
TRIM48-201ENST00000417545 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
TRIM48-201ENST00000417545 TRBV7-1A0A0A6YYK4 115 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 GNG7O60262 68 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 NDUFB8O95169 186 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 IGHV3-23P01764 117 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
TRIM48-201ENST00000417545 METTL15P1P0C7V9 234 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 SLC25A4P12235 298 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 P2RY1P47900 373 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 NPBWR1P48145 328 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 MFAP4P55083 255 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 AKR1C1Q04828 323 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 C11orf87Q6NUJ2 197 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 NDUFA11Q86Y39 141 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 ZNF491Q8N8L2 437 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 INO80EQ8NBZ0 244 aaPredicted RBP6.59□□□□□ -1.35
TRIM48-201ENST00000417545 OR10P1Q8NGE3 313 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 ACY3Q96HD9 319 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 OR4C12Q96R67 309 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 LYRM2Q9NU23 88 aaPredicted RBP6.59□□□□□ -1.35
TRIM48-201ENST00000417545 C21orf62Q9NYP8 219 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 OR5AC2Q9NZP5 309 aa6.59□□□□□ -1.35
TRIM48-201ENST00000417545 TRBV9A0A0B4J1U6 114 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 MFSD2BA6NFX1 497 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 C15orf62A8K5M9 175 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 M0QZ24 198 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 BRI3O95415 125 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 IGHV3-48P01763 117 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 GPR183P32249 361 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 ARL3P36405 182 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 CDX1P47902 265 aaPredicted RBP6.59□□□□□ -1.36
TRIM48-201ENST00000417545 SRSF4Q08170 494 aaKnown RBP6.59□□□□□ -1.36
TRIM48-201ENST00000417545 HIST2H2BDQ6DRA6 164 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 CLEC19AQ6UXS0 136 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 SLC16A13Q7RTY0 426 aa6.59□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM217Q8N7C4 229 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms