RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 YIF1AO95070 293 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 CD74P04233 296 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 CTSDP07339 412 aaPredicted RBP13.69□□□□□ -0.22
VPS16-204ENST00000417508 NPBWR1P48145 328 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 SUB1P53999 127 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS16-204ENST00000417508 TAS2R19P59542 299 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 MRPS10P82664 201 aaKnown RBP13.69□□□□□ -0.22
VPS16-204ENST00000417508 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 GALNT14Q96FL9 552 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 RHPN1-AS1Q9BWJ2 59 aa13.69□□□□□ -0.22
VPS16-204ENST00000417508 IGHV3OR16-8A0A075B7F1 116 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 CORTO00230 105 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 ZNF207O43670 478 aaKnown RBP13.68□□□□□ -0.22
VPS16-204ENST00000417508 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 P0C879 139 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 BMI1P35226 326 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 AKR1C2P52895 323 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 GINS3Q9BRX5 216 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
VPS16-204ENST00000417508 UBQLN2Q9UHD9 624 aa13.68□□□□□ -0.22
VPS16-204ENST00000417508 A0A0B4J293 547 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 GABARAPH6UMI1 98 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 SPRY2O43597 315 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 RAB3DO95716 219 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 IFNA17P01571 189 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 PI3P19957 117 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 RNASE12Q5GAN4 147 aaKnown RBP13.67□□□□□ -0.22
VPS16-204ENST00000417508 PVRIGQ6DKI7 326 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 SLC35G3Q8N808 338 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 PINX1Q96BK5 328 aaKnown RBP13.67□□□□□ -0.22
VPS16-204ENST00000417508 RRNAD1Q96FB5 475 aaKnown RBP13.67□□□□□ -0.22
VPS16-204ENST00000417508 RNF2Q99496 336 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
VPS16-204ENST00000417508 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
VPS16-204ENST00000417508 STARD9Q9P2P6 4700 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 ST8SIA3O43173 380 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 UCP1P25874 307 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 MEF2DQ14814 521 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 TRIM16LQ309B1 348 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 STEAP1BQ6NZ63 245 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 MRPS26Q9BYN8 205 aaKnown RBP13.66□□□□□ -0.22
VPS16-204ENST00000417508 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
VPS16-204ENST00000417508 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
VPS16-204ENST00000417508 IZUMO4Q1ZYL8 232 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 SCGB2B2Q4G0G5 96 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 FAM219AQ8IW50 185 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 OR13C8Q8NGS7 320 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 RNF183Q96D59 192 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 RYR2Q92736 4967 aa13.65□□□□□ -0.22
VPS16-204ENST00000417508 LYSTQ99698 3801 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 RGS5O15539 181 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 TMEM50AO95807 157 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 IGHV3-48P01763 117 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 RPL5P46777 297 aaKnown RBP13.64□□□□□ -0.23
VPS16-204ENST00000417508 ALDH3B2P48448 385 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 PPP5CP53041 499 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 SURF2Q15527 256 aaPredicted RBP13.64□□□□□ -0.23
VPS16-204ENST00000417508 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 TOMM20LQ6UXN7 152 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 ZNF600Q6ZNG1 722 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 OR4D10Q8NGI6 311 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 MARCH1Q8TCQ1 289 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 MIXL1Q9H2W2 232 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 MAP6D1Q9H9H5 199 aa13.64□□□□□ -0.23
VPS16-204ENST00000417508 DISC1C4P0D8 188 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 SCGB2A1O75556 95 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 CDS2O95674 445 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 ETV6P41212 452 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 SP6Q3SY56 376 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 SPINK9Q5DT21 86 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 OR52E5Q8NH55 327 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 TMEM222Q9H0R3 208 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
VPS16-204ENST00000417508 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.63□□□□□ -0.23
VPS16-204ENST00000417508 C14orf166Q9Y224 244 aaKnown RBP13.63□□□□□ -0.23
VPS16-204ENST00000417508 CTDSP2O14595 271 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 CTDSPLO15194 276 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 RNASE2P10153 161 aaKnown RBP13.62□□□□□ -0.23
VPS16-204ENST00000417508 HOXA1P49639 335 aaPredicted RBP13.62□□□□□ -0.23
VPS16-204ENST00000417508 SPCS3P61009 180 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 DHODHQ02127 395 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 DEFB135Q30KP9 77 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 AARDQ4LEZ3 155 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 LYG2Q86SG7 212 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 TMEM217Q8N7C4 229 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 RNASE11Q8TAA1 199 aaKnown RBP13.62□□□□□ -0.23
VPS16-204ENST00000417508 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 TMEM231Q9H6L2 316 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
VPS16-204ENST00000417508 IGHV3-49A0A0A0MS15 119 aa13.61□□□□□ -0.23
VPS16-204ENST00000417508 TRAV2A0A0B4J234 112 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms