RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 OR5B3Q8NH48 314 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 LINC00476Q8WZB0 136 aa13.65□□□□□ -0.22
VCP-202ENST00000417448 LSM10Q969L4 123 aaKnown RBP13.65□□□□□ -0.22
VCP-202ENST00000417448 KIAA1109Q2LD37 5005 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 IGLV11-55A0A075B6I3 123 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 MFSD2BA6NFX1 497 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 LINC01619G3V211 115 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 UPK1BO75841 260 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 BRI3O95415 125 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
VCP-202ENST00000417448 PRCDQ00LT1 54 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 LGI3Q8N145 548 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 NECAP1Q8NC96 275 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 RETNQ9HD89 108 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 ZC4H2Q9NQZ6 224 aa13.64□□□□□ -0.23
VCP-202ENST00000417448 C9orf170A2RU37 121 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 PPP5D1E7EU14 171 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 HLA-AP01891 365 aaKnown RBP13.63□□□□□ -0.23
VCP-202ENST00000417448 TCRBP04435 133 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 FGF2P09038 288 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 HOXB5P09067 269 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 ANXA3P12429 323 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
VCP-202ENST00000417448 USMG5Q96IX5 58 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 C20orf85Q9H1P6 137 aa13.63□□□□□ -0.23
VCP-202ENST00000417448 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.63□□□□□ -0.23
VCP-202ENST00000417448 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
VCP-202ENST00000417448 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 IGHV3-48P01763 117 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 OR4E1P0C645 316 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 CLEC19AQ6UXS0 136 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 OR2C3Q8N628 320 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 IL22RA2Q969J5 263 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
VCP-202ENST00000417448 PLEKHA3Q9HB20 300 aa13.62□□□□□ -0.23
VCP-202ENST00000417448 F11RQ9Y624 299 aaKnown RBP13.62□□□□□ -0.23
VCP-202ENST00000417448 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 ADAP1O75689 374 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 DHFRP00374 187 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 HOXA1P49639 335 aaPredicted RBP13.61□□□□□ -0.23
VCP-202ENST00000417448 DHRS2Q13268 280 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 ASAH1Q13510 395 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 NMSQ5H8A3 153 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 FAM219AQ8IW50 185 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 CCDC140Q96MF4 163 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 SEC22CQ9BRL7 303 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 PDCD10Q9BUL8 212 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 NUDT15Q9NV35 164 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
VCP-202ENST00000417448 BMPR1BO00238 502 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 SULT1A3P0DMM9 295 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 SULT1A4P0DMN0 295 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
VCP-202ENST00000417448 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
VCP-202ENST00000417448 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 IL17DQ8TAD2 202 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 MISP3Q96FF7 219 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 FAM110AQ9BQ89 295 aa13.6□□□□□ -0.23
VCP-202ENST00000417448 RANGRFQ9HD47 186 aaPredicted RBP13.6□□□□□ -0.23
VCP-202ENST00000417448 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
VCP-202ENST00000417448 H2AFB2P0C5Z0 115 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 SRPXP78539 464 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
VCP-202ENST00000417448 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 KLK9Q2XQG4 91 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 GGNBP1Q5YKI7 109 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
VCP-202ENST00000417448 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 KLK9Q9UKQ9 250 aa13.59□□□□□ -0.23
VCP-202ENST00000417448 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 CEBPZOSA8MTT3 80 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 MPTX1A8MV57 137 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 OR2C1O95371 312 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 SPCS3P61009 180 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 LRTM2Q8N967 370 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
VCP-202ENST00000417448 RBKSQ9H477 322 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 ENY2Q9NPA8 101 aa13.58□□□□□ -0.24
VCP-202ENST00000417448 K7EIM0 57 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 LY6G6CO95867 125 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 CLEC3BP05452 202 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
VCP-202ENST00000417448 GPR183P32249 361 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 MLANAQ16655 118 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 NRARPQ7Z6K4 114 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 OR1P1Q8NH06 330 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 SCARB1Q8WTV0 552 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 OR4C12Q96R67 309 aa13.57□□□□□ -0.24
VCP-202ENST00000417448 HEYLQ9NQ87 328 aaPredicted RBP13.57□□□□□ -0.24
VCP-202ENST00000417448 EDN2P20800 178 aa13.56□□□□□ -0.24
VCP-202ENST00000417448 ARL3P36405 182 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms