RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HES7Q9BYE0 225 aa12.15□□□□□ -0.46
NCKIPSD-204ENST00000416649 C7orf71A4D174 169 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 FCGR3BO75015 233 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 IGHV3-7P01780 117 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 HES3Q5TGS1 186 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 LINC00596Q86U02 117 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 GNG7O60262 68 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 PPOXP50336 477 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 RPS20P60866 119 aaKnown RBP12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 C3AR1Q16581 482 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 LHFPL4Q7Z7J7 247 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 LY96Q9Y6Y9 160 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 HCFC1P51610 2035 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 TNFSF15O95150 251 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 AESQ08117 197 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
NCKIPSD-204ENST00000416649 C12orf77C9JDV5 145 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 NBEAP1P0C6P0 100 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 TCTAP57738 103 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 OR1N2Q8NGR9 330 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 ACACAQ13085 2346 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 LOC102723996A0A087X1L8 192 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 SMIM27A0A1W2PRY6 76 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 GJE1A6NN92 205 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 ISLRO14498 428 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 CDIPTO14735 213 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 MRPL33O75394 65 aaKnown RBP12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 MT-CO3P00414 261 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 TRIB1Q96RU8 372 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
NCKIPSD-204ENST00000416649 HBZP02008 142 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 IGFBP2P18065 325 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 CD5LO43866 347 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 DKK1O94907 266 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 LEPROTL1O95214 131 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 GRPP07492 148 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 DEFB124Q8NES8 71 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 CLUHP3Q96NS8 147 aa12.12□□□□□ -0.47
NCKIPSD-204ENST00000416649 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 PAX2Q02962 417 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 ADGRG4Q8IZF6 3080 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 ARR3P36575 388 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 FOXE3Q13461 319 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 RAB31Q13636 194 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 TMEM164Q5U3C3 297 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 TACC2O95359 2948 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
NCKIPSD-204ENST00000416649 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 PSPNO60542 156 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 P04436 131 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 AREGP15514 252 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 TMEM108Q6UXF1 575 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 NUP35Q8NFH5 326 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 J3QT63 122 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 GPR183P32249 361 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 H3BUT2 72 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 KALRNO60229 2985 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 IGLV2-8P01709 118 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 RAB37Q96AX2 223 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-204ENST00000416649 APC2O95996 2303 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 ZNF138P52744 262 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 GGNQ86UU5 652 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 TMEM251Q8N6I4 163 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 C5orf17Q8NAS9 161 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 C1orf159Q96HA4 380 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 DUSP13Q9UII6 198 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 GFRA3O60609 400 aa12.09□□□□□ -0.47
NCKIPSD-204ENST00000416649 CELA3AP09093 270 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms